RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 RSPH10BP0C881 870 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.66
LETMD1-217ENST00000548516 MBTPS1Q14703 1052 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 IQCA1Q86XH1 822 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 DGKHQ86XP1 1220 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 PXMP2Q9NR77 195 aa10.9□□□□□ -0.66
LETMD1-217ENST00000548516 ARIH1Q9Y4X5 557 aaPredicted RBP10.9□□□□□ -0.66
LETMD1-217ENST00000548516 TRIP12Q14669 1992 aaPredicted RBP10.9□□□□□ -0.66
LETMD1-217ENST00000548516 MUC6Q6W4X9 2439 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 B4E1Z4 1266 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 GGPS1O95749 300 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 PARP1P09874 1014 aaKnown RBP10.89□□□□□ -0.67
LETMD1-217ENST00000548516 RBL2Q08999 1139 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 GPM6BQ13491 265 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 HIC1Q14526 733 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 PTPROQ16827 1216 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
LETMD1-217ENST00000548516 CCDC178Q5BJE1 867 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 YME1L1Q96TA2 773 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 JMJD4Q9H9V9 463 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 MLXIPQ9HAP2 919 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 REV3LO60673 3130 aa10.89□□□□□ -0.67
LETMD1-217ENST00000548516 C17orf102A2RUQ5 167 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 HAS3O00219 553 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 F2P00734 622 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 CTSHP09668 335 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
LETMD1-217ENST00000548516 NT5C2P49902 561 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 AAMPQ13685 434 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 HSDL1Q3SXM5 330 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 EPC2Q52LR7 807 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 ASPRV1Q53RT3 343 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 SEPT8Q92599 483 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 ATP6V0A1Q93050 837 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
LETMD1-217ENST00000548516 ZSCAN10Q96SZ4 725 aaPredicted RBP10.88□□□□□ -0.67
LETMD1-217ENST00000548516 RWDD1Q9H446 243 aaPredicted RBP10.88□□□□□ -0.67
LETMD1-217ENST00000548516 DIAPH3Q9NSV4 1193 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 CTNNA3Q9UI47 895 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 PIEZO1Q92508 2521 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 TRANK1O15050 2925 aa10.88□□□□□ -0.67
LETMD1-217ENST00000548516 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 PRR33A8MZF0 331 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 HIP1O00291 1037 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 CSPG5O95196 566 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 ALADP13716 330 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 SDSP20132 328 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 TCEAL5Q5H9L2 206 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
LETMD1-217ENST00000548516 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 CWC27Q6UX04 472 aaKnown RBP10.87□□□□□ -0.67
LETMD1-217ENST00000548516 FCHSD1Q86WN1 690 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.67
LETMD1-217ENST00000548516 MRPL38Q96DV4 380 aaKnown RBP10.87□□□□□ -0.67
LETMD1-217ENST00000548516 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 AMNQ9BXJ7 453 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
LETMD1-217ENST00000548516 TREHO43280 583 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 RGS20O76081 388 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 SMIM10L2AP0DMW4 78 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 SMIM10L2BP0DMW5 78 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 HTRA4P83105 476 aaPredicted RBP10.86□□□□□ -0.67
LETMD1-217ENST00000548516 SP2Q02086 613 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 CLUL1Q15846 466 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 UTP14CQ5TAP6 766 aaKnown RBP10.86□□□□□ -0.67
LETMD1-217ENST00000548516 KCNV1Q6PIU1 500 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 SERINC5Q86VE9 423 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 HOMER1Q86YM7 354 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 TMEM192Q8IY95 271 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 ENAHQ8N8S7 591 aaPredicted RBP10.86□□□□□ -0.67
LETMD1-217ENST00000548516 IL31RAQ8NI17 732 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 ANKS1AQ92625 1134 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 MAF1Q9H063 256 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 CLDND1Q9NY35 253 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 PCDHA1Q9Y5I3 950 aa10.86□□□□□ -0.67
LETMD1-217ENST00000548516 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
LETMD1-217ENST00000548516 H3BNC9 293 aa10.85□□□□□ -0.67
LETMD1-217ENST00000548516 H3BRB1 525 aa10.85□□□□□ -0.67
LETMD1-217ENST00000548516 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
LETMD1-217ENST00000548516 DCXO43602 365 aa10.85□□□□□ -0.67
LETMD1-217ENST00000548516 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
LETMD1-217ENST00000548516 CCND2P30279 289 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms