RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ARIH2O95376 493 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 RARBP10826 455 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 SMPD1P17405 629 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 DUSP28Q4G0W2 176 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 ANO1Q5XXA6 986 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 PLA2G4DQ86XP0 818 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 DEFB118Q96PH6 123 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 TMEM106CQ9BVX2 250 aa26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 DDX41Q9UJV9 622 aaKnown RBP26.33■■□□□ 1.81
SMARCD1-203ENST00000547247 IGLV3-22A0A075B6J6 115 aa26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 CYP3A7-CYP3A51PA0A087WV96 503 aa26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 NKRFO15226 690 aaKnown RBP eCLIP26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 DUSP11O75319 330 aaKnown RBP26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 GCFC2P16383 781 aaKnown RBP26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 CYP3A7P24462 503 aa26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 SETQ01105 290 aaPredicted RBP26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 PRR16Q569H4 304 aa26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 KCNH7Q9NS40 1196 aa26.33■■□□□ 1.8
SMARCD1-203ENST00000547247 CCNT1O60563 726 aaKnown RBP26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 TDP2O95551 362 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 GJB1P08034 283 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 SEMA3FQ13275 785 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 LY6KQ17RY6 165 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 TMEM63BQ5T3F8 832 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 PPP4R3AQ6IN85 833 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 FERMT3Q86UX7 667 aa26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 NOL7Q9UMY1 257 aaKnown RBP26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 GNEQ9Y223 722 aaKnown RBP26.32■■□□□ 1.8
SMARCD1-203ENST00000547247 LHX8Q68G74 356 aa26.31■■□□□ 1.8
SMARCD1-203ENST00000547247 BRAPQ7Z569 592 aa26.31■■□□□ 1.8
SMARCD1-203ENST00000547247 LENG1Q96BZ8 264 aaPredicted RBP26.31■■□□□ 1.8
SMARCD1-203ENST00000547247 POTEFA5A3E0 1075 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 ARP10275 920 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 TRAPPC10P48553 1259 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 Q4G0T1 1027 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 GJC2Q5T442 439 aaPredicted RBP26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 MBOAT7Q96N66 472 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 SENP7Q9BQF6 1050 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 DDX25Q9UHL0 483 aaKnown RBP26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 Q9Y3F1 56 aa26.3■■□□□ 1.8
SMARCD1-203ENST00000547247 ATP2B1P20020 1258 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 SP2Q02086 613 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 COPS5Q92905 334 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 LENG9Q96B70 501 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 XPNPEP3Q9NQH7 507 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 KIAA0100Q14667 2235 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 GH1P01241 217 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 UBA1P22314 1058 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 NEDD9Q14511 834 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 TLK2Q86UE8 772 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 GIMAP8Q8ND71 665 aaPredicted RBP26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 U2AF1L4Q8WU68 220 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 AP5M1Q9H0R1 490 aa26.29■■□□□ 1.8
SMARCD1-203ENST00000547247 DYNC1LI2O43237 492 aaPredicted RBP26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 ATP9AO75110 1047 aa26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 SGPL1O95470 568 aa26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 RILPL1Q5EBL4 403 aa26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 DHX37Q8IY37 1157 aaKnown RBP26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 ZSCAN16Q9H4T2 348 aaPredicted RBP26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 SPC25Q9HBM1 224 aa26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 AGO4Q9HCK5 861 aaKnown RBP26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 PKD2L1Q9P0L9 805 aa26.28■■□□□ 1.8
SMARCD1-203ENST00000547247 GGPS1O95749 300 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 KCNA2P16389 499 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 PTGS1P23219 599 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 RESTQ13127 1097 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 CELF3Q5SZQ8 465 aaKnown RBP26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 OR6J1Q8NGC5 347 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 ZNF577Q9BSK1 485 aa26.27■■□□□ 1.8
SMARCD1-203ENST00000547247 IPO5O00410 1097 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 WNT7AO00755 349 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 SLC37A4O43826 429 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 PGK1P00558 417 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 ZSCAN22P10073 491 aaPredicted RBP26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 GJA8P48165 433 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 TOB1P50616 345 aaPredicted RBP26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 GJA9P57773 515 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 TTC38Q5R3I4 469 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 CRISPLD2Q9H0B8 497 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 MLXIPQ9HAP2 919 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 OGDHLQ9ULD0 1010 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 SYNRGQ9UMZ2 1314 aa26.26■■□□□ 1.79
SMARCD1-203ENST00000547247 ARHGAP1Q07960 439 aa26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 ORC2Q13416 577 aaPredicted RBP26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 LAMC2Q13753 1193 aa26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 PKP1Q13835 747 aa26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 MYSM1Q5VVJ2 828 aa26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 CYFIP1Q7L576 1253 aa26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 EMID1Q96A84 441 aaPredicted RBP26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 UPF3AQ9H1J1 476 aaKnown RBP26.25■■□□□ 1.79
SMARCD1-203ENST00000547247 MSH4O15457 936 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 ADAMTS4O75173 837 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 TFRCP02786 760 aaKnown RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 C6orf222P0C671 652 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 CAPN2P17655 700 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 MCM7P33993 719 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 METTL7BQ6UX53 244 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 ARRDC4Q8NCT1 418 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 SDF4Q9BRK5 362 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 NFASCO94856 1347 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms