RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TXKP42681 527 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 PDIA5Q14554 519 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 ETNPPLQ8TBG4 499 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 USP6NLQ92738 828 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 MAML3Q96JK9 1138 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 FGD4Q96M96 766 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 RIT2Q99578 217 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 KCNH7Q9NS40 1196 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 TCEAL9Q9UHQ7 104 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 PCDHA12Q9UN75 941 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 STK24Q9Y6E0 443 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 ASTN1O14525 1302 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 SYNGAP1Q96PV0 1343 aa17.89■□□□□ 0.45
TRAFD1-203ENST00000547063 IPO5O00410 1097 aaKnown RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 MSH4O15457 936 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 FKTNO75072 461 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 MBD3O95983 291 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TGFB3P10600 412 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 XRCC5P13010 732 aaKnown RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 CMA1P23946 247 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 ICAM3P32942 547 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 IRF5Q13568 498 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 SKOR2Q2VWA4 1001 aaPredicted RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 AXDND1Q5T1B0 1012 aaPredicted RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 ARMCX2Q7L311 632 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TRMT44Q8IYL2 757 aaKnown RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 CYP2W1Q8TAV3 490 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 HAS1Q92839 578 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 SLC5A5Q92911 643 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TRIM47Q96LD4 638 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 WDR11Q9BZH6 1224 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TTC12Q9H892 705 aaPredicted RBP17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 VTA1Q9NP79 307 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TBC1D22BQ9NU19 505 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 GJD2Q9UKL4 321 aa17.88■□□□□ 0.45
TRAFD1-203ENST00000547063 TXLNAP40222 546 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 LRCH2Q5VUJ6 765 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 OLFML2BQ68BL8 750 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 GIMAP8Q8ND71 665 aaPredicted RBP17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 MRPS27Q92552 414 aaKnown RBP17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 FAM13BQ9NYF5 915 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
TRAFD1-203ENST00000547063 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 SPATA31C2B4DYI2 1134 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 GAS7O60861 476 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 ARP10275 920 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 CCDC73Q6ZRK6 1079 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 IGSF22Q8N9C0 903 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 NPLOC4Q8TAT6 608 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 SENP7Q9BQF6 1050 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 PYM1Q9BRP8 204 aaKnown RBP17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 TEKT3Q9BXF9 490 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 ABHD16BQ9H3Z7 469 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 AGO4Q9HCK5 861 aaKnown RBP17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 WBP1LQ9NX94 342 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 MRVI1Q9Y6F6 885 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 LRRC37A2A6NM11 1700 aa17.86■□□□□ 0.45
TRAFD1-203ENST00000547063 SLC26A4O43511 780 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 CYP2B6P20813 491 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 TECP42680 631 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 PRMT2P55345 433 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 RESP18Q5W5W9 173 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 SEPT14Q6ZU15 432 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 ERMNQ8TAM6 284 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 SCFD2Q8WU76 684 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 ZFP91Q96JP5 570 aaPredicted RBP17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 CLIC6Q96NY7 704 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 LRWD1Q9UFC0 647 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 CASP8AP2Q9UKL3 1982 aa17.85■□□□□ 0.45
TRAFD1-203ENST00000547063 NFASCO94856 1347 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 GADD45BO75293 160 aaPredicted RBP17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 PSMD10O75832 226 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 RGS20O76081 388 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 ECM2O94769 699 aaPredicted RBP17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 CTGFP29279 349 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 UBA7P41226 1012 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 NEDD9Q14511 834 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 TTLL4Q14679 1199 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 IL17AQ16552 155 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 DNAJC5GQ8N7S2 189 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 CD99L2Q8TCZ2 262 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
TRAFD1-203ENST00000547063 MCM3APO60318 1980 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 FLT3LGP49771 235 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 KRT76Q01546 638 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 KRT79Q5XKE5 535 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 HAUS3Q68CZ6 603 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 SHC4Q6S5L8 630 aa17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 ZNF296Q8WUU4 475 aaPredicted RBP17.83■□□□□ 0.44
TRAFD1-203ENST00000547063 CCSER1Q9C0I3 900 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms