RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ZNF76P36508 570 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 CPT1AP50416 773 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 USP11P51784 963 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 LAMC2Q13753 1193 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 NEDD9Q14511 834 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 KCNA10Q16322 511 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 CEP55Q53EZ4 464 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 NIPA1Q7RTP0 329 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 COPS5Q92905 334 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 SENP7Q9BQF6 1050 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 HTATIP2Q9BUP3 242 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
CCDC38-203ENST00000546803 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
CCDC38-203ENST00000546803 A6NJR5 290 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 KPNA6O60684 536 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 MMP1P03956 469 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 KRT2P35908 639 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 ACLYP53396 1101 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 MLLT1Q03111 559 aaPredicted RBP19.16■□□□□ 0.66
CCDC38-203ENST00000546803 ARHGAP1Q07960 439 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 MTMR1Q13613 665 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 CELF3Q5SZQ8 465 aaKnown RBP19.16■□□□□ 0.66
CCDC38-203ENST00000546803 KRT40Q6A162 431 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 DHX37Q8IY37 1157 aaKnown RBP19.16■□□□□ 0.66
CCDC38-203ENST00000546803 GIMAP8Q8ND71 665 aaPredicted RBP19.16■□□□□ 0.66
CCDC38-203ENST00000546803 SNX21Q969T3 373 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 C8orf76Q96K31 380 aa19.16■□□□□ 0.66
CCDC38-203ENST00000546803 SENP6Q9GZR1 1112 aaPredicted RBP19.16■□□□□ 0.66
CCDC38-203ENST00000546803 LRRC37A2A6NM11 1700 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 CCDC194A0A1B0GVG4 234 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 MEIS1O00470 390 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 ASGR1P07306 291 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 UBA1P22314 1058 aaKnown RBP19.15■□□□□ 0.66
CCDC38-203ENST00000546803 PTGS1P23219 599 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 CIITAP33076 1130 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 IRX5P78411 483 aaPredicted RBP19.15■□□□□ 0.66
CCDC38-203ENST00000546803 BEX3Q00994 111 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 SEMA3FQ13275 785 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 CUL4AQ13619 759 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 NONOQ15233 471 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC38-203ENST00000546803 SAFBQ15424 915 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC38-203ENST00000546803 TBCKQ8TEA7 893 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 POLR3EQ9NVU0 708 aa19.15■□□□□ 0.66
CCDC38-203ENST00000546803 CABYRO75952 493 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 GGPS1O95749 300 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 SP2Q02086 613 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 MYSM1Q5VVJ2 828 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 METTL7BQ6UX53 244 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 FBXO18Q8NFZ0 1043 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 AFG1LQ8WV93 481 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 GLT1D1Q96MS3 346 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 MLXIPQ9HAP2 919 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 KCNH7Q9NS40 1196 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 SMC3Q9UQE7 1217 aa19.14■□□□□ 0.65
CCDC38-203ENST00000546803 A0A1W2PQ45 241 aaPredicted RBP19.13■□□□□ 0.65
CCDC38-203ENST00000546803 A0A1W2PQY0 241 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 FAM86B1E9PN63 330 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 K7ELQ4 463 aaPredicted RBP19.13■□□□□ 0.65
CCDC38-203ENST00000546803 FAM86B2P0C5J1 330 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 FOSBP53539 338 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 SETQ01105 290 aaPredicted RBP19.13■□□□□ 0.65
CCDC38-203ENST00000546803 DIS3L2Q8IYB7 885 aaKnown RBP19.13■□□□□ 0.65
CCDC38-203ENST00000546803 PPTC7Q8NI37 304 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 CYP2W1Q8TAV3 490 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 OXER1Q8TDS5 423 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 ELP1O95163 1332 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 MCM3APO60318 1980 aa19.13■□□□□ 0.65
CCDC38-203ENST00000546803 KCNA2P16389 499 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 C1orf53Q5VUE5 145 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 MOXD1Q6UVY6 613 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 PLA2G4DQ86XP0 818 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 TNFRSF25Q93038 417 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 FERMT2Q96AC1 680 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 SPATA33Q96N06 139 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 STARD7Q9NQZ5 370 aa19.12■□□□□ 0.65
CCDC38-203ENST00000546803 IGLV3-22A0A075B6J6 115 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 CYP3A7-CYP3A51PA0A087WV96 503 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 BTBD18B2RXH4 712 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 ATP9AO75110 1047 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 PPFIA4O75335 1185 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 MMP3P08254 477 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 ARP10275 920 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 CYP3A7P24462 503 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 GJB2P29033 226 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 PURAQ00577 322 aaKnown RBP19.11■□□□□ 0.65
CCDC38-203ENST00000546803 NR5A1Q13285 461 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 DGKDQ16760 1214 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 CXCL17Q6UXB2 119 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 PIK3AP1Q6ZUJ8 805 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 CYFIP1Q7L576 1253 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 HSCBQ8IWL3 235 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 INTS4Q96HW7 963 aaKnown RBP19.11■□□□□ 0.65
CCDC38-203ENST00000546803 NAP1L4Q99733 375 aaKnown RBP19.11■□□□□ 0.65
CCDC38-203ENST00000546803 MTG1Q9BT17 334 aaPredicted RBP19.11■□□□□ 0.65
CCDC38-203ENST00000546803 SEZ6LQ9BYH1 1024 aa19.11■□□□□ 0.65
CCDC38-203ENST00000546803 AGO4Q9HCK5 861 aaKnown RBP19.11■□□□□ 0.65
CCDC38-203ENST00000546803 NFASCO94856 1347 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 NOP56O00567 594 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms