RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 NKX3-2P78367 333 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 Q4G0T1 1027 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 PRAMEF19Q5SWL8 479 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 RTEL1Q9NZ71 1219 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
SNHG1-221ENST00000544983 TNRC18O15417 2968 aaPredicted RBP13.35□□□□□ -0.27
SNHG1-221ENST00000544983 FAM86B1E9PN63 330 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 FAM86B2P0C5J1 330 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 ADCYAP1R1P41586 468 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 LAMC2Q13753 1193 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 MTFR1Q15390 333 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 PRPF38BQ5VTL8 546 aaKnown RBP13.34□□□□□ -0.27
SNHG1-221ENST00000544983 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 ARRDC4Q8NCT1 418 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 TBC1D22BQ9NU19 505 aa13.34□□□□□ -0.27
SNHG1-221ENST00000544983 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
SNHG1-221ENST00000544983 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
SNHG1-221ENST00000544983 IGLV3-22A0A075B6J6 115 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 TBX3O15119 743 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
SNHG1-221ENST00000544983 SGPL1O95470 568 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 GH1P01241 217 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 SMPD1P17405 629 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 GJA9P57773 515 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 PRR16Q569H4 304 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 LHX8Q68G74 356 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 RNF180Q86T96 592 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 SDF4Q9BRK5 362 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
SNHG1-221ENST00000544983 XPNPEP3Q9NQH7 507 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 DDX25Q9UHL0 483 aaKnown RBP13.33□□□□□ -0.28
SNHG1-221ENST00000544983 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
SNHG1-221ENST00000544983 NFASCO94856 1347 aa13.33□□□□□ -0.28
SNHG1-221ENST00000544983 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 IPO5O00410 1097 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 ZEB2O60315 1214 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 KPNA6O60684 536 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 BMP15O95972 392 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 UBA1P22314 1058 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CST5P28325 142 aaPredicted RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 GJA8P48165 433 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CPT1AP50416 773 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CELF3Q5SZQ8 465 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 TLK2Q86UE8 772 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 U2AF1L4Q8WU68 220 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 LENG9Q96B70 501 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 DEFB118Q96PH6 123 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 RIT2Q99578 217 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 AGO4Q9HCK5 861 aaKnown RBP13.32□□□□□ -0.28
SNHG1-221ENST00000544983 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 CENPFP49454 3210 aa13.32□□□□□ -0.28
SNHG1-221ENST00000544983 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.31□□□□□ -0.28
SNHG1-221ENST00000544983 LAD1O00515 517 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 EDIL3O43854 480 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 ZSCAN22P10073 491 aaPredicted RBP13.31□□□□□ -0.28
SNHG1-221ENST00000544983 KCNA2P16389 499 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 NUCB2P80303 420 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 LY6KQ17RY6 165 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 ATL3Q6DD88 541 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
SNHG1-221ENST00000544983 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 ZNF577Q9BSK1 485 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 TSEN34Q9BSV6 310 aaKnown RBP13.31□□□□□ -0.28
SNHG1-221ENST00000544983 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 ATP6V1DQ9Y5K8 247 aa13.31□□□□□ -0.28
SNHG1-221ENST00000544983 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 A6NJR5 290 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
SNHG1-221ENST00000544983 NEMFO60524 1076 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 ARIH2O95376 493 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 TDP2O95551 362 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 GGPS1O95749 300 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms