RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 DHX37Q8IY37 1157 aaKnown RBP16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 KATNAL1Q9BW62 490 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
SEMA4D-224ENST00000544513 CYTH3O43739 400 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 BMP1P13497 986 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 CHMLP26374 656 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 SP2Q02086 613 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 PTH1RQ03431 593 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 TRAF1Q13077 416 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 HIC1Q14526 733 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 HSDL1Q3SXM5 330 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 WNT8BQ93098 351 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 PIGSQ96S52 555 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 CERS4Q9HA82 394 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 TAF6LQ9Y6J9 622 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
SEMA4D-224ENST00000544513 PNMA6FA0A0J9YX94 578 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 LPXNO60711 386 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 KCNJ6P48051 423 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 TRDNQ13061 729 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 MBTPS1Q14703 1052 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 SPRED2Q7Z698 418 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 UHRF1Q96T88 793 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 C16orf70Q9BSU1 422 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
SEMA4D-224ENST00000544513 ABHD14A-ACY1A0A1B0GW23 586 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 IFIT3O14879 490 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 TLL1O43897 1013 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 GGPS1O95749 300 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 UBA1P22314 1058 aaKnown RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 CCND2P30279 289 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 HOXC8P31273 242 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 DEFB103AP81534 67 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 ZNF200P98182 395 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 TFF2Q03403 129 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 MICALL1Q8N3F8 863 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 ARNTL2Q8WYA1 636 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
SEMA4D-224ENST00000544513 E7EWF7 191 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 GJB5O95377 273 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 GRB10Q13322 594 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 KRT40Q6A162 431 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 TMCO2Q7Z6W1 182 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 IGDCC4Q8TDY8 1250 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
SEMA4D-224ENST00000544513 SGSM2O43147 1006 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 EFCAB14O75071 495 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 ICAM3P32942 547 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 ANTXR2P58335 489 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 MRPS9P82933 396 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 WTAPQ15007 396 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 INPP4AQ96PE3 977 aaPredicted RBP16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 RAD9AQ99638 391 aa16.07■□□□□ 0.16
SEMA4D-224ENST00000544513 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 ERICH2A1L162 156 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 SPATA31C2B4DYI2 1134 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 STAM2O75886 525 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 IKBKEQ14164 716 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 IL27Q8NEV9 243 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 MAP3K14Q99558 947 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 COG5Q9UP83 839 aa16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-224ENST00000544513 H3BRB1 525 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 RBAK-RBAKDNI3L0D1 243 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 SORBS3O60504 671 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 LGR5O75473 907 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 LGALS2P05162 132 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 KCNQ1P51787 676 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 ERVK-21P61565 698 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms