RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NOP56O00567 594 aaKnown RBP7.17□□□□□ -1.26
LTBR-212ENST00000543542 ARIH2O95376 493 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 BAG4O95429 457 aaKnown RBP7.17□□□□□ -1.26
LTBR-212ENST00000543542 GGPS1O95749 300 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 MYL3P08590 195 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 CYP3A4P08684 503 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 GJA8P48165 433 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 CPT1AP50416 773 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 USP11P51784 963 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 CHMP4BP1P59074 171 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 SETQ01105 290 aaPredicted RBP7.17□□□□□ -1.26
LTBR-212ENST00000543542 SP4Q02446 784 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 NEDD9Q14511 834 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 NPY5RQ15761 445 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 DUSP28Q4G0W2 176 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 CEP55Q53EZ4 464 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 PRR16Q569H4 304 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 GNASQ5JWF2 1037 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 GJC2Q5T442 439 aaPredicted RBP7.17□□□□□ -1.26
LTBR-212ENST00000543542 CYFIP1Q7L576 1253 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 NOSTRINQ8IVI9 506 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 GIMAP8Q8ND71 665 aaPredicted RBP7.17□□□□□ -1.26
LTBR-212ENST00000543542 COPS5Q92905 334 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 GPRASP2Q96D09 838 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 UIMC1Q96RL1 719 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 SDF4Q9BRK5 362 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 ZNF577Q9BSK1 485 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 KATNBL1Q9H079 304 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 UBIAD1Q9Y5Z9 338 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 SYNRGQ9UMZ2 1314 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 HTTP42858 3142 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 DOCK5Q9H7D0 1870 aa7.17□□□□□ -1.26
LTBR-212ENST00000543542 RBM47A0AV96 593 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 POTEFA5A3E0 1075 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 FAM205CA6NFA0 338 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 SPATA31C2B4DYI2 1134 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 MAFGO15525 162 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 STX6O43752 255 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 RGS20O76081 388 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 TDP2O95551 362 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 IGHA2P01877 340 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 ARP10275 920 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 TGFB3P10600 412 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 GCFC2P16383 781 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 CAPN2P17655 700 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 ITGB5P18084 799 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 EN2P19622 333 aaPredicted RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 SYT1P21579 422 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 UBA1P22314 1058 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 BEX3Q00994 111 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 LAMC2Q13753 1193 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 LRRC41Q15345 812 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 FSCN1Q16658 493 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 EARS2Q5JPH6 523 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 TMEM63BQ5T3F8 832 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 FOXD4L5Q5VV16 416 aaPredicted RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 LHX8Q68G74 356 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 NIPA1Q7RTP0 329 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 FERMT3Q86UX7 667 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 PCSK9Q8NBP7 692 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 CYP2W1Q8TAV3 490 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 FOXD4L4Q8WXT5 416 aaPredicted RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 SPATA33Q96N06 139 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 INPP4AQ96PE3 977 aaPredicted RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 KCNH7Q9NS40 1196 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 DDX25Q9UHL0 483 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 DDX41Q9UJV9 622 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 OGDHLQ9ULD0 1010 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
LTBR-212ENST00000543542 Q9Y3F1 56 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 SAMM50Q9Y512 469 aa7.16□□□□□ -1.26
LTBR-212ENST00000543542 KIF28PB7ZC32 967 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 FAM86B1E9PN63 330 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 IPO5O00410 1097 aaKnown RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 MEIS1O00470 390 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 ADCY6O43306 1168 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 GAS7O60861 476 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 ATP9AO75110 1047 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 FARP2O94887 1054 aaPredicted RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 ASGR1P07306 291 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 FAM86B2P0C5J1 330 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 PDIA4P13667 645 aaKnown RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 PTGS1P23219 599 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 ICAM3P32942 547 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 CIITAP33076 1130 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 MCM7P33993 719 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 GJA9P57773 515 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 SP2Q02086 613 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 ZNF174Q15697 407 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 KCNA10Q16322 511 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 CALCRLQ16602 461 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 DGKDQ16760 1214 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 Q4G0T1 1027 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 TTC38Q5R3I4 469 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 CELF3Q5SZQ8 465 aaKnown RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 UTP14CQ5TAP6 766 aaKnown RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 LRCH2Q5VUJ6 765 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 CCDC62Q6P9F0 684 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 BRAPQ7Z569 592 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 NECAB2Q7Z6G3 386 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms