RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 KATNAL1Q9BW62 490 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 THEGQ9P2T0 379 aa22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 COL4A4P53420 1690 aaPredicted RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 PRRC2BQ5JSZ5 2229 aaKnown RBP22.76■■□□□ 1.23
CACNA1C-230ENST00000543114 PNMA6FA0A0J9YX94 578 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 GCOM1H8Y6P7 765 aaPredicted RBP22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 BAIAP3O94812 1187 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 ARHGEF15O94989 841 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 GGPS1O95749 300 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 POLR2MP0CAP2 368 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 SELPP16109 830 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 KIAA0753Q2KHM9 967 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 HSDL1Q3SXM5 330 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 CELF3Q5SZQ8 465 aaKnown RBP22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 MYSM1Q5VVJ2 828 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 HERC6Q8IVU3 1022 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 WNT8BQ93098 351 aa22.75■■□□□ 1.23
CACNA1C-230ENST00000543114 CKBP12277 381 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 CCND2P30279 289 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 SP2Q02086 613 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 PHOSPHO2Q8TCD6 241 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 MAP4K1Q92918 833 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 SPATA33Q96N06 139 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 CERS4Q9HA82 394 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 RBM8AQ9Y5S9 174 aaKnown RBP22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 FRMPD4Q14CM0 1322 aa22.74■■□□□ 1.23
CACNA1C-230ENST00000543114 EPOPA6NHQ4 379 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 ZNF200P98182 395 aaPredicted RBP22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 TRAF1Q13077 416 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 HIC1Q14526 733 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 KCNV1Q6PIU1 500 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 CATIPQ7Z7H3 387 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 IGDCC4Q8TDY8 1250 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 PIBF1Q8WXW3 757 aa22.73■■□□□ 1.23
CACNA1C-230ENST00000543114 RFXAPO00287 272 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 NBNO60934 754 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 WDR5P61964 334 aaKnown RBP22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 TCTN1Q2MV58 587 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 TRIM71Q2Q1W2 868 aaKnown RBP22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 TRAF7Q6Q0C0 670 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 MICALL1Q8N3F8 863 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 ATXN2LQ8WWM7 1075 aaKnown RBP22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 MYL10Q9BUA6 226 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 LY9Q9HBG7 655 aa22.72■■□□□ 1.23
CACNA1C-230ENST00000543114 CXCL10P02778 98 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 KCNJ6P48051 423 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 TAP1Q03518 808 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 PTK7Q13308 1070 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 COL9A3Q14050 684 aaPredicted RBP22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 CNKSR3Q6P9H4 555 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 SPRED2Q7Z698 418 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 TMCO2Q7Z6W1 182 aaPredicted RBP22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 C16orf70Q9BSU1 422 aa22.71■■□□□ 1.23
CACNA1C-230ENST00000543114 MICAL3Q7RTP6 2002 aa22.7■■□□□ 1.23
CACNA1C-230ENST00000543114 PPFIA4O75335 1185 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 TGFB3P10600 412 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 DEFB103AP81534 67 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 MRPS9P82933 396 aaKnown RBP22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 ZNF654Q8IZM8 581 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 INPP4AQ96PE3 977 aaPredicted RBP22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 ASB2Q96Q27 587 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 BCAS3Q9H6U6 928 aa22.7■■□□□ 1.22
CACNA1C-230ENST00000543114 TLL1O43897 1013 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 DDAH1O94760 285 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 PARNO95453 639 aaKnown RBP22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 SEMA3FQ13275 785 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 MBTPS1Q14703 1052 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 ZNF618Q5T7W0 954 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 CTCFLQ8NI51 663 aaPredicted RBP22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 SPZ1Q9BXG8 430 aa22.69■■□□□ 1.22
CACNA1C-230ENST00000543114 LCHNA4D1U4 455 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 KIF28PB7ZC32 967 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 ARNTL2Q8WYA1 636 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 MAP3K14Q99558 947 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 MLXIPQ9HAP2 919 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 MTCH2Q9Y6C9 303 aa22.68■■□□□ 1.22
CACNA1C-230ENST00000543114 NCOR1O75376 2440 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 PRC1O43663 620 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 LGALS2P05162 132 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 MRPS5P82675 430 aaKnown RBP22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 GNPTABQ3T906 1256 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 KRT40Q6A162 431 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 SERINC5Q86VE9 423 aa22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 LSG1Q9H089 658 aaKnown RBP22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 TCF20Q9UGU0 1960 aaKnown RBP22.67■■□□□ 1.22
CACNA1C-230ENST00000543114 SIP14410 1827 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 SH2B2O14492 632 aaPredicted RBP22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 POU3F3P20264 500 aaPredicted RBP22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 HOXC8P31273 242 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 ICAM3P32942 547 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 KIF5BP33176 963 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 USP17L6PQ6QN14 398 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 CASC1Q6TDU7 716 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 METTL7BQ6UX53 244 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 RRP36Q96EU6 259 aaKnown RBP22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 RTEL1Q9NZ71 1219 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 TELO2Q9Y4R8 837 aa22.66■■□□□ 1.22
CACNA1C-230ENST00000543114 ABHD14A-ACY1A0A1B0GW23 586 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 SPATA31C2B4DYI2 1134 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms