RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 HMX1Q9NP08 348 aaPredicted RBP13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 BTBD7Q9P203 1132 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 USP34Q70CQ2 3546 aa13.98□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ZDBF2Q9HCK1 2354 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NFIBO00712 420 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FIBPO43427 364 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CYP3A4P08684 503 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ERVK-24P63145 666 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TRIM32Q13049 653 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 STK38Q15208 465 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 UBE2SQ16763 222 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 INF2Q27J81 1249 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TMEM31Q5JXX7 168 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RNF207Q6ZRF8 634 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RBPJLQ9UBG7 517 aa13.97□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ADAMTS3O15072 1205 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SPTLC2O15270 562 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RPS6P62753 249 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PLS1Q14651 629 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PTPAQ15257 358 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FOXD4L6Q3SYB3 417 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MUM1L1Q5H9M0 696 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ARL6IP4Q66PJ3 421 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 PAGR1Q9BTK6 254 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TMEM260Q9NX78 707 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 RIPK3Q9Y572 518 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 ZNF236Q9UL36 1845 aa13.96□□□□□ -0.17
CACNA1C-IT3-201ENST00000542680 SPTBN4Q9H254 2564 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TRANK1O15050 2925 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CYP3A7-CYP3A51PA0A087WV96 503 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 LOC102724159A0A0B4J2E5 919 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CYP3A7P24462 503 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CIITAP33076 1130 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PRPHP41219 470 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 UBE2HP62256 183 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ARHGAP4P98171 946 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PWP2Q15269 919 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MBOAT7Q96N66 472 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TXNRD2Q9NNW7 524 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 LMBRD1Q9NUN5 540 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NEMFO60524 1076 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MBD3O95983 291 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TAL1P17542 331 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ERCC3P19447 782 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SKOR2Q2VWA4 1001 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NSMFQ6X4W1 530 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 C11orf16Q9NQ32 467 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 LCTP09848 1927 aa13.94□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 A0A1W2PQ27 194 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 A0A1W2PQ64 194 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 A0A1W2PQD8 194 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 B4DLN1 442 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 TBX3O15119 743 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PRPF40AO75400 957 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 STAM2O75886 525 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PTPREP23469 700 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 Q4G0T1 1027 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ADALQ6DHV7 355 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 SLC30A10Q6XR72 485 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 NIPA1Q7RTP0 329 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 ZNF579Q8NAF0 562 aaKnown RBP13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 PPM1EQ8WY54 764 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
CACNA1C-IT3-201ENST00000542680 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms