RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 NPY5RQ15761 445 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
THBS3-211ENST00000541990 ZNF507Q8TCN5 953 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 JDP2Q8WYK2 163 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 PLIN2Q99541 437 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 NHEJ1Q9H9Q4 299 aaPredicted RBP10.13□□□□□ -0.79
THBS3-211ENST00000541990 CKAP4Q07065 602 aaKnown RBP10.13□□□□□ -0.79
THBS3-211ENST00000541990 SBK1Q52WX2 424 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 FAM212AQ96EL1 285 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ZIM3Q96PE6 472 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 SERPINB13Q9UIV8 391 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ZNRF3Q9ULT6 936 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 ZNF541Q9H0D2 1346 aa10.13□□□□□ -0.79
THBS3-211ENST00000541990 SNED1Q8TER0 1413 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 PP2D1A8MPX8 630 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 LGALS16A8MUM7 142 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 MOCS3O95396 460 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 RPN1P04843 607 aaKnown RBP10.12□□□□□ -0.79
THBS3-211ENST00000541990 FAM153BP0C7A2 387 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 SHMT1P34896 483 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 SEC24CP53992 1094 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 TRIM14Q14142 442 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 DLGAP5Q15398 846 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 FAM153CQ494X1 144 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 HAUS3Q68CZ6 603 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 KCTD1Q719H9 257 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 AMOTL1Q8IY63 956 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 FAM163AQ96GL9 167 aaPredicted RBP10.12□□□□□ -0.79
THBS3-211ENST00000541990 RNPC3Q96LT9 517 aaKnown RBP10.12□□□□□ -0.79
THBS3-211ENST00000541990 ZDHHC15Q96MV8 337 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 CSRNP1Q96S65 589 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 FAM153AQ9UHL3 310 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 BRCA2P51587 3418 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 LTBP1Q14766 1721 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 CYTH3O43739 400 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
THBS3-211ENST00000541990 MCM3P25205 808 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 HMGB2P26583 209 aaKnown RBP10.12□□□□□ -0.79
THBS3-211ENST00000541990 MCM7P33993 719 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 KRT2P35908 639 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 TGFB2P61812 414 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 SEPT2Q15019 361 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 SPRED3Q2MJR0 410 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 TTC38Q5R3I4 469 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 C16orf86Q6ZW13 317 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 OGFOD1Q8N543 542 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 SPATA4Q8NEY3 305 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 LRRC15Q8TF66 581 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 TTYH3Q9C0H2 523 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 FAM107BQ9H098 131 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 CAPN11Q9UMQ6 739 aa10.12□□□□□ -0.79
THBS3-211ENST00000541990 WNT10BO00744 389 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 KRT86O43790 486 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 ORC4O43929 436 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 GMPSP49915 693 aaPredicted RBP10.11□□□□□ -0.79
THBS3-211ENST00000541990 DNA2P51530 1060 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 TRADDQ15628 312 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 ZNF658Q5TYW1 1059 aaPredicted RBP10.11□□□□□ -0.79
THBS3-211ENST00000541990 TNFRSF25Q93038 417 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 GLIS2Q9BZE0 524 aaPredicted RBP10.11□□□□□ -0.79
THBS3-211ENST00000541990 SALL4Q9UJQ4 1053 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 NID2Q14112 1375 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 EPHB6O15197 1021 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
THBS3-211ENST00000541990 SPAG1Q07617 926 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 FUT2Q10981 343 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 MEA1Q16626 185 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 HHIPL2Q6UWX4 724 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
THBS3-211ENST00000541990 SNX12Q9UMY4 172 aa10.11□□□□□ -0.79
THBS3-211ENST00000541990 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 DDNO94850 711 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 VIL1P09327 827 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 FGRP09769 529 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 ERCC3P19447 782 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 TRIM21P19474 475 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 ECE1P42892 770 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 CIAPIN1Q6FI81 312 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 PSMD1Q99460 953 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SPON1Q9HCB6 807 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 RBM12Q9NTZ6 932 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 ZNF70Q9UC06 446 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 ZNF233A6NK53 670 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 GOLGA8KD6RF30 607 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 H0YHG0 523 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 BACH1O14867 736 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 GH2P01242 217 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms