RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ABCC11Q96J66 1382 aa6.46□□□□□ -1.37
DDB1-219ENST00000541513 A0A096LPE4 126 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 A0A1W2PPZ6 126 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 AREL1O15033 823 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 PRODHO43272 600 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 FKBP9O95302 570 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 DDX58O95786 925 aaKnown RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 ADH1CP00326 375 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 CPP00450 1065 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 IFIT1P09914 478 aaKnown RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 TATP17735 454 aaPredicted RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 PSMA3P25788 255 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 GRIK1P39086 918 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 WASHC5Q12768 1159 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 SEMA5AQ13591 1074 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 TERF2Q15554 542 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 BBS9Q3SYG4 887 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 GNPTABQ3T906 1256 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 SLC10A5Q5PT55 438 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 IFIT1BQ5T764 474 aaKnown RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 KIAA1614Q5VZ46 1190 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 FKBP9P1Q75LS8 142 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 FASTKD5Q7L8L6 764 aaKnown RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 NSUN6Q8TEA1 469 aaKnown RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 TBC1D20Q96BZ9 403 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 DDX11Q96FC9 970 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 AGBL1Q96MI9 1066 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 NLRP3Q96P20 1036 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 PRKRIP1Q9H875 184 aaPredicted RBP6.46□□□□□ -1.38
DDB1-219ENST00000541513 ATP6V0A4Q9HBG4 840 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 ARFGAP3Q9NP61 516 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 MRFAP1Q9Y605 127 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 NCOA3Q9Y6Q9 1424 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 ERBB4Q15303 1308 aa6.46□□□□□ -1.38
DDB1-219ENST00000541513 LRRC7Q96NW7 1537 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 FAM135BQ49AJ0 1406 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 EYA2O00167 538 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA12O60330 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 OFD1O75665 1012 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 CD4P01730 458 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 HOXD8P13378 290 aaPredicted RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 GLULP15104 373 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 HOXC13P31276 330 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 CAP2P40123 477 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 IL6STP40189 918 aaPredicted RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 HTRA3P83110 453 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SKOR1P84550 965 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 IFIT5Q13325 482 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 ARID5BQ14865 1188 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SART3Q15020 963 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PIK3R6Q5UE93 754 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 AGAP9Q5VTM2 703 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SWSAP1Q6NVH7 229 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SPOCD1Q6ZMY3 1216 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 C4orf50Q6ZRC1 276 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 DPP9Q86TI2 863 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 ZNF227Q86WZ6 799 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 COLGALT2Q8IYK4 626 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SLFN12Q8IYM2 578 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 KRT78Q8N1N4 520 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 LSMEM1Q8N8F7 131 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 HDAC2Q92769 488 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 PTPRN2Q92932 1015 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 RSRC1Q96IZ7 334 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 WNK4Q96J92 1243 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 VTA1Q9NP79 307 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 EMC7Q9NPA0 242 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.45□□□□□ -1.38
DDB1-219ENST00000541513 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA9Q9Y5G4 932 aaKnown RBP6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA8Q9Y5G5 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA7Q9Y5G6 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA6Q9Y5G7 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA3Q9Y5H0 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PCDHGA2Q9Y5H1 932 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 SLC4A7Q9Y6M7 1214 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 NALCNQ8IZF0 1738 aa6.45□□□□□ -1.38
DDB1-219ENST00000541513 PABPN1LA6NDY0 278 aaKnown RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 SLC22A31A6NKX4 558 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 ZNF891A8MT65 544 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 CBX4O00257 560 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 AP1G1O43747 822 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 ITGAVP06756 1048 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 OAS2P29728 719 aaKnown RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 UBA7P41226 1012 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 PTGIRP43119 386 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 SESN3P58005 492 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 IL2P60568 153 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 ZNF252P-AS1Q0IIN9 211 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 SFSWAPQ12872 951 aaKnown RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 TRIM32Q13049 653 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 G3BP1Q13283 466 aaKnown RBP eCLIP6.44□□□□□ -1.382e-8■■■□□ 15.7
DDB1-219ENST00000541513 SKOR2Q2VWA4 1001 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 PKDCCQ504Y2 493 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms