RNA–Protein interactions for RNA: ENST00000541042.5

C1R-208, Transcript of complement C1r, human

TSL 5

Gene C1R, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1R-208	ENST00000541042		H0YGN5	161 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	EVI5	O60447	810 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	UBA1	P22314	1058 aa	Known RBP	11.74	□□□□□ -0.53
C1R-208	ENST00000541042	GNA11	P29992	359 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	SREBF1	P36956	1147 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	CDK7	P50613	346 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	RTP1	P59025	263 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	AP3B2	Q13367	1082 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	TRIM60	Q495X7	471 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	C1orf53	Q5VUE5	145 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	KCNV1	Q6PIU1	500 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	CCDC83	Q8IWF9	413 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	REXO1	Q8N1G1	1221 aa	Known RBP	11.74	□□□□□ -0.53
C1R-208	ENST00000541042	EMID1	Q96A84	441 aa	Predicted RBP	11.74	□□□□□ -0.53
C1R-208	ENST00000541042	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.74	□□□□□ -0.53
C1R-208	ENST00000541042	MXRA8	Q9BRK3	442 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	PHF20	Q9BVI0	1012 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	JADE2	Q9NQC1	790 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	STARD7	Q9NQZ5	370 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	PCDHA4	Q9UN74	947 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	ELP1	O95163	1332 aa		11.74	□□□□□ -0.53
C1R-208	ENST00000541042	FAM86B1	E9PN63	330 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	MEIS1	O00470	390 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	FIBP	O43427	364 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	GGPS1	O95749	300 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	CYP3A4	P08684	503 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	FAM86B2	P0C5J1	330 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	AR	P10275	920 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	PSMC6	P62333	389 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	ARHGAP4	P98171	946 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	PURA	Q00577	322 aa	Known RBP	11.73	□□□□□ -0.53
C1R-208	ENST00000541042	TLE2	Q04725	743 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	LAMC2	Q13753	1193 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	HSDL1	Q3SXM5	330 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	GNPTAB	Q3T906	1256 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	DHX37	Q8IY37	1157 aa	Known RBP	11.73	□□□□□ -0.53
C1R-208	ENST00000541042	C7orf61	Q8IZ16	206 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	SLC43A3	Q8NBI5	491 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	CCDC148	Q8NFR7	591 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	OXER1	Q8TDS5	423 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	PPP1R13L	Q8WUF5	828 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	KAT2B	Q92831	832 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	VTI1A	Q96AJ9	217 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	GPRASP2	Q96D09	838 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	GLT1D1	Q96MS3	346 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	ALG1	Q9BT22	464 aa		11.73	□□□□□ -0.53
C1R-208	ENST00000541042	ARVCF	O00192	962 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	ZEB2	O60315	1214 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	MMP3	P08254	477 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	MYL3	P08590	195 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	HOXD8	P13378	290 aa	Predicted RBP	11.72	□□□□□ -0.53
C1R-208	ENST00000541042	KCNA2	P16389	499 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	CPT1A	P50416	773 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	CEP55	Q53EZ4	464 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	CYFIP1	Q7L576	1253 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	SH3RF1	Q7Z6J0	888 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	NLRX1	Q86UT6	975 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	BLID	Q8IZY5	108 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	FAM177A1	Q8N128	213 aa	Predicted RBP	11.72	□□□□□ -0.53
C1R-208	ENST00000541042	DAGLB	Q8NCG7	672 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	BICD2	Q8TD16	824 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	TMX3	Q96JJ7	454 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	SPATA33	Q96N06	139 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	SENP7	Q9BQF6	1050 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	LLPH	Q9BRT6	129 aa	Known RBP	11.72	□□□□□ -0.53
C1R-208	ENST00000541042	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.72	□□□□□ -0.53
C1R-208	ENST00000541042	KCNH7	Q9NS40	1196 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.72	□□□□□ -0.53
C1R-208	ENST00000541042	ATP11B	Q9Y2G3	1177 aa		11.72	□□□□□ -0.53
C1R-208	ENST00000541042	RANBP2	P49792	3224 aa	Known RBP	11.71	□□□□□ -0.53
C1R-208	ENST00000541042	KIAA1217	Q5T5P2	1943 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	ALPK3	Q96L96	1907 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	IGLV3-22	A0A075B6J6	115 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	MAFG	O15525	162 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	ST18	O60284	1047 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	KPNA6	O60684	536 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	PPFIA4	O75335	1185 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	CABYR	O75952	493 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	SYN1	P17600	705 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	CIITA	P33076	1130 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	MTMR1	Q13613	665 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	ITGA7	Q13683	1181 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	NEDD9	Q14511	834 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	EARS2	Q5JPH6	523 aa	Known RBP	11.71	□□□□□ -0.53
C1R-208	ENST00000541042	MCTP2	Q6DN12	878 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	GALNT17	Q6IS24	598 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	METTL7B	Q6UX53	244 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	ANKRD33	Q7Z3H0	272 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	PPTC7	Q8NI37	304 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	UIMC1	Q96RL1	719 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	MTG1	Q9BT17	334 aa	Predicted RBP	11.71	□□□□□ -0.53
C1R-208	ENST00000541042	EHMT1	Q9H9B1	1298 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	MLXIP	Q9HAP2	919 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	POLR3E	Q9NVU0	708 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	PKD2L1	Q9P0L9	805 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042	NR2E3	Q9Y5X4	410 aa		11.71	□□□□□ -0.53
C1R-208	ENST00000541042		A0A0U1RQG5	324 aa	Predicted RBP	11.7	□□□□□ -0.54
C1R-208	ENST00000541042	TRIM43B	A6NCK2	446 aa		11.7	□□□□□ -0.54
C1R-208	ENST00000541042	DHX15	O43143	795 aa	Known RBP	11.7	□□□□□ -0.54
C1R-208	ENST00000541042	PQBP1	O60828	265 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms