RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SEMA3FQ13275 785 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 USP17L6PQ6QN14 398 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 TMCO2Q7Z6W1 182 aaPredicted RBP16.74■□□□□ 0.27
MSRB3-209ENST00000540804 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
MSRB3-209ENST00000540804 SPATA33Q96N06 139 aa16.74■□□□□ 0.27
MSRB3-209ENST00000540804 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 ARHGEF15O94989 841 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 F2P00734 622 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 MCM5P33992 734 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 BFSP2Q13515 415 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
MSRB3-209ENST00000540804 TCEANC2Q96MN5 208 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
MSRB3-209ENST00000540804 SPTBN5Q9NRC6 3674 aaKnown RBP16.73■□□□□ 0.27
MSRB3-209ENST00000540804 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 VCANP13611 3396 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 RFXAPO00287 272 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 MEIS2O14770 477 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 PFKMP08237 780 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 IGFBP4P22692 258 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
MSRB3-209ENST00000540804 SPRED2Q7Z698 418 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 SAMD3Q8N6K7 520 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 GAS2L1Q99501 681 aaPredicted RBP16.72■□□□□ 0.27
MSRB3-209ENST00000540804 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 CERS4Q9HA82 394 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 MLXIPQ9HAP2 919 aa16.72■□□□□ 0.27
MSRB3-209ENST00000540804 FRMPD4Q14CM0 1322 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 MYH6P13533 1939 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 NBNO60934 754 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 CA3P07451 260 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 CKBP12277 381 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 HOXD8P13378 290 aaPredicted RBP16.71■□□□□ 0.27
MSRB3-209ENST00000540804 KIF5BP33176 963 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 RFC2P35250 354 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 TRAF1Q13077 416 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 TRIM71Q2Q1W2 868 aaKnown RBP16.71■□□□□ 0.27
MSRB3-209ENST00000540804 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 LRRC8DQ7L1W4 858 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
MSRB3-209ENST00000540804 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 PPFIA4O75335 1185 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 ACTN1P12814 892 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 SELPP16109 830 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 UBE2SQ16763 222 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 TRAF7Q6Q0C0 670 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 CYFIP1Q7L576 1253 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 CAGE1Q8TC20 777 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 AFAP1L1Q8TED9 768 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 INPP4AQ96PE3 977 aaPredicted RBP16.7■□□□□ 0.26
MSRB3-209ENST00000540804 KATNAL1Q9BW62 490 aa16.7■□□□□ 0.26
MSRB3-209ENST00000540804 EPOPA6NHQ4 379 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 LGALS2P05162 132 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 TGFB3P10600 412 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 LIFRP42702 1097 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 DEFB103AP81534 67 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 SP4Q02446 784 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 MBTPS1Q14703 1052 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 BMP2KLQ5H9B9 411 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
MSRB3-209ENST00000540804 MICU3Q86XE3 530 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 TRIM50Q86XT4 487 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 RASEFQ8IZ41 740 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 CCDC155Q8N6L0 562 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
MSRB3-209ENST00000540804 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
MSRB3-209ENST00000540804 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
MSRB3-209ENST00000540804 GBF1Q92538 1859 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 ICAM3P32942 547 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 WDR5P61964 334 aaKnown RBP16.68■□□□□ 0.26
MSRB3-209ENST00000540804 PTK7Q13308 1070 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
MSRB3-209ENST00000540804 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 TMTC2Q8N394 836 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 MICALL1Q8N3F8 863 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 CUL5Q93034 780 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 GPR20Q99678 358 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 OSBPL7Q9BZF2 842 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
MSRB3-209ENST00000540804 TANC1Q9C0D5 1861 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 LCHNA4D1U4 455 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 H3BRB1 525 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms