RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 VSIG10LQ86VR7 867 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 FCHSD1Q86WN1 690 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 DAGLBQ8NCG7 672 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 FTOQ9C0B1 505 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATL3-204ENST00000540699 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 RCOR1Q9UKL0 485 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
ATL3-204ENST00000540699 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
ATL3-204ENST00000540699 LAMA2P24043 3122 aaKnown RBP12.06□□□□□ -0.48
ATL3-204ENST00000540699 ADAMTS3O15072 1205 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
ATL3-204ENST00000540699 NR3C2P08235 984 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 AKR1A1P14550 325 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
ATL3-204ENST00000540699 UBE2HP62256 183 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 PDE4DQ08499 809 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 NR5A1Q13285 461 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 DIS3LQ8TF46 1054 aaKnown RBP12.06□□□□□ -0.48
ATL3-204ENST00000540699 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
ATL3-204ENST00000540699 DOCK5Q9H7D0 1870 aa12.06□□□□□ -0.48
ATL3-204ENST00000540699 A0A1W2PPC1 479 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 ADCY6O43306 1168 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 EVI5O60447 810 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 STAM2O75886 525 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 YEATS4O95619 227 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 MBD3O95983 291 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 SREBF1P36956 1147 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 TOB1P50616 345 aaPredicted RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 NLRP5P59047 1200 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 NKX3-2P78367 333 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 MRPS9P82933 396 aaKnown RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 STXBP2Q15833 593 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 CCDC144BQ3MJ40 725 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 EARS2Q5JPH6 523 aaKnown RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 IQSEC1Q6DN90 963 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 FBXO16Q8IX29 292 aaPredicted RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 LINC00301Q8NCQ3 95 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 CRYGNQ8WXF5 182 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 PAWRQ96IZ0 340 aaKnown RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
ATL3-204ENST00000540699 OGDHLQ9ULD0 1010 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 PCDHA6Q9UN73 950 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 PCDHA4Q9UN74 947 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 PCDHA8Q9Y5H6 950 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 CLIC4Q9Y696 253 aa12.05□□□□□ -0.48
ATL3-204ENST00000540699 DUSP11O75319 330 aaKnown RBP12.04□□□□□ -0.48
ATL3-204ENST00000540699 RGS20O76081 388 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 CCND2P30279 289 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
ATL3-204ENST00000540699 PTPAQ15257 358 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 RILPL1Q5EBL4 403 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 CCDC62Q6P9F0 684 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 BLIDQ8IZY5 108 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 ANKLE1Q8NAG6 615 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
ATL3-204ENST00000540699 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 PDGFCQ9NRA1 345 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 TMEM260Q9NX78 707 aa12.04□□□□□ -0.48
ATL3-204ENST00000540699 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
ATL3-204ENST00000540699 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 CNGA1P29973 690 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 ICAM3P32942 547 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
ATL3-204ENST00000540699 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 EEPD1Q7L9B9 569 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 NECAB2Q7Z6G3 386 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 UPF3AQ9H1J1 476 aaKnown RBP12.03□□□□□ -0.48
ATL3-204ENST00000540699 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
ATL3-204ENST00000540699 Q9Y3F1 56 aa12.03□□□□□ -0.48
ATL3-204ENST00000540699 WDR81Q562E7 1941 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 A0A0C4DFX4 3053 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.02□□□□□ -0.49
ATL3-204ENST00000540699 NKRFO15226 690 aaKnown RBP eCLIP12.02□□□□□ -0.49
ATL3-204ENST00000540699 EDIL3O43854 480 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 ADAMTS4O75173 837 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 CYP3A4P08684 503 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 TGFB3P10600 412 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 RARBP10826 455 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
ATL3-204ENST00000540699 SMPD1P17405 629 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 GJA9P57773 515 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 TNFAIP2Q03169 654 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.49
ATL3-204ENST00000540699 SLC39A14Q15043 492 aa12.02□□□□□ -0.49
ATL3-204ENST00000540699 SF3A1Q15459 793 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms