RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 KIAA0753Q2KHM9 967 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 FAM173BQ6P4H8 233 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ENAHQ8N8S7 591 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 EYA3Q99504 573 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 DESI2Q9BSY9 194 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 HAUS4Q9H6D7 363 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 NRDE2Q9H7Z3 1164 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF148Q9UQR1 794 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SRPRBQ9Y5M8 271 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 MROH7-TTC4A0A0A0MT08 1334 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 FAM205AQ6ZU69 1335 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 KLRG2A4D1S0 409 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SRRM3A6NNA2 597 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 STX10O60499 249 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PFKFB1P16118 471 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PAX3P23760 479 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 USP5P45974 858 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 NOP2P46087 812 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ARL6IP4Q66PJ3 421 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 BICDL1Q6ZP65 573 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 MAIP1Q8WWC4 291 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 DCP1AQ9NPI6 582 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 LCMT1Q9UIC8 334 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 TSC22D4Q9Y3Q8 395 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 COL1A1P02452 1464 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ZMYND10O75800 440 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 TCP1P17987 556 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PTPREP23469 700 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 GLE1Q53GS7 698 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 CFAP157Q5JU67 520 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 RCSD1Q6JBY9 416 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 TBC1D1Q86TI0 1168 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 MIGA1Q8NAN2 632 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 DAGLBQ8NCG7 672 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SPDYE1Q8NFV5 336 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 NAP1L4Q99733 375 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 GLT8D2Q9H1C3 349 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 IRS2Q9Y4H2 1338 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 RANBP6O60518 1105 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 CDC27P30260 824 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ALDH1B1P30837 517 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 FKBP1AP62942 108 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PTPAQ15257 358 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 CCDC122Q5T0U0 273 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 CC2D1AQ6P1N0 951 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SP8Q8IXZ3 490 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 MCUR1Q96AQ8 359 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 XAB2Q9HCS7 855 aaKnown RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PALMDQ9NP74 551 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 KCND1Q9NSA2 647 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 SLC4A7Q9Y6M7 1214 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 BICDL2A1A5D9 508 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 GUCY2FP51841 1108 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 IQCB1Q15051 598 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 C8orf74Q6P047 294 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 CENPKQ9BS16 269 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 OSBPL1AQ9BXW6 950 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-214ENST00000540109 MKL2Q9ULH7 1088 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
PTPRD-214ENST00000540109 ECM29Q5VYK3 1845 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 MYO1FO00160 1098 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 SLC26A4O43511 780 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 EIF3BP55884 814 aaKnown RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 NFIXQ14938 502 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 FGD4Q96M96 766 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PSMB7Q99436 277 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PHF20Q9BVI0 1012 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 UBR3Q6ZT12 1888 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 AKR1B10O60218 316 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 ATICP31939 592 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 FANCCQ00597 558 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CETN1Q12798 172 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CASP8Q14790 479 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 EMBQ6PCB8 327 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF444Q8N0Y2 327 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 XPO4Q9C0E2 1151 aaKnown RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 COA1Q9GZY4 146 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CLIC4Q9Y696 253 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PLIN4Q96Q06 1357 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 AKR1B15C9JRZ8 316 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 TM4SF1P30408 202 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CORO7P57737 925 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 ITIH3Q06033 890 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GRM4Q14833 912 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PPP1R18Q6NYC8 613 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 B4GALNT2Q8NHY0 566 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 DRC3Q9H069 523 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CSRNP2Q9H175 543 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GOLPH3LQ9H4A5 285 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 FRMD4BQ9Y2L6 1034 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms