RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ADAMTS4O75173 837 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 DUSP11O75319 330 aaKnown RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 EIF3JO75822 258 aaKnown RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 STAM2O75886 525 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 ARIH2O95376 493 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 MMP1P03956 469 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 RARBP10826 455 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 MYCLP12524 364 aaPredicted RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 SMPD1P17405 629 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 XBP1P17861 261 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 EN2P19622 333 aaPredicted RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 PTGS1P23219 599 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 SREBF1P36956 1147 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 NLRP5P59047 1200 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 TNFAIP2Q03169 654 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 CUL4AQ13619 759 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 DUSP28Q4G0W2 176 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 TMEM63BQ5T3F8 832 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 JAKMIP3Q5VZ66 844 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 ANO1Q5XXA6 986 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 MCTP2Q6DN12 878 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 GALNT17Q6IS24 598 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 XRRA1Q6P2D8 792 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 Q6ZNB5 142 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 BLIDQ8IZY5 108 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 SCFD2Q8WU76 684 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 SNX21Q969T3 373 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 INPP4AQ96PE3 977 aaPredicted RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 UPF3AQ9H1J1 476 aaKnown RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 XPNPEP3Q9NQH7 507 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 KCNJ14Q9UNX9 436 aa7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 GNEQ9Y223 722 aaKnown RBP7.98□□□□□ -1.13
LPCAT3-209ENST00000540060 SCN10AQ9Y5Y9 1956 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 K7ELQ4 463 aaPredicted RBP7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 CTAGE5O15320 804 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 CAPN2P17655 700 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 NKX3-2P78367 333 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 ARHGAP4P98171 946 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 GNPTABQ3T906 1256 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 GJC2Q5T442 439 aaPredicted RBP7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 KRT40Q6A162 431 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 IQSEC1Q6DN90 963 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 CCDC62Q6P9F0 684 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 SEPT14Q6ZU15 432 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 UBE2Q1Q7Z7E8 422 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 ANKLE1Q8NAG6 615 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 TNFRSF25Q93038 417 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 ZFP91Q96JP5 570 aaPredicted RBP7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 WDR11Q9BZH6 1224 aa7.97□□□□□ -1.13
LPCAT3-209ENST00000540060 LTBP2Q14767 1821 aa7.96□□□□□ -1.13
LPCAT3-209ENST00000540060 IGLV3-22A0A075B6J6 115 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 MYADML2A6NDP7 307 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 DNM1LO00429 736 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 NKRFO15226 690 aaKnown RBP eCLIP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 FIBPO43427 364 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 FARP2O94887 1054 aaPredicted RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 PGK1P00558 417 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 TFRCP02786 760 aaKnown RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 CYP3A4P08684 503 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 TXNP10599 105 aaKnown RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 ITGB5P18084 799 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 CST5P28325 142 aaPredicted RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 GJB2P29033 226 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 ICAM3P32942 547 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 KRT2P35908 639 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 FOSBP53539 338 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 GJA9P57773 515 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 ARHGAP1Q07960 439 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 SEMA3FQ13275 785 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 TRIM29Q14134 588 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 LRRC41Q15345 812 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 LY6KQ17RY6 165 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 KCNV1Q6PIU1 500 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 KRT25Q7Z3Z0 450 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 FAM184AQ8NB25 1140 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 COPS5Q92905 334 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 GPRASP2Q96D09 838 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 C8orf76Q96K31 380 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 DDX41Q9UJV9 622 aaKnown RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 Q9Y3F1 56 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 UBIAD1Q9Y5Z9 338 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 MRVI1Q9Y6F6 885 aa7.96□□□□□ -1.14
LPCAT3-209ENST00000540060 ARID2Q68CP9 1835 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 SPATA31C2B4DYI2 1134 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 KBTBD13C9JR72 458 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 FAM86B1E9PN63 330 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 EDIL3O43854 480 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 FAM86B2P0C5J1 330 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 C6orf222P0C671 652 aaPredicted RBP7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 TGFB3P10600 412 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 COL6A1P12109 1028 aa7.95□□□□□ -1.14
LPCAT3-209ENST00000540060 SP2Q02086 613 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms