RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TRIM17Q9Y577 477 aa11.57□□□□□ -0.56
CLPB-210ENST00000539148 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 LRRC37A2A6NM11 1700 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 ADCY3O60266 1144 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 MSCO60682 206 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 HMGCRP04035 888 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 ICAM3P32942 547 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 TXLNAP40222 546 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 ZNF445P59923 1031 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 UBXN2AP68543 259 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 PRKCZQ05513 592 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 SLC39A14Q15043 492 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 CTU1Q7Z7A3 348 aaKnown RBP11.56□□□□□ -0.56
CLPB-210ENST00000539148 PGBD1Q96JS3 809 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 SENP7Q9BQF6 1050 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.56□□□□□ -0.56
CLPB-210ENST00000539148 PCDHA12Q9UN75 941 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 MRVI1Q9Y6F6 885 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 LOXHD1Q8IVV2 1947 aa11.56□□□□□ -0.56
CLPB-210ENST00000539148 MYH9P35579 1960 aaKnown RBP11.56□□□□□ -0.56
CLPB-210ENST00000539148 IPO5O00410 1097 aaKnown RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 SPTLC2O15270 562 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 DKC1O60832 514 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLPB-210ENST00000539148 PPP6R2O75170 966 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 CAPN2P17655 700 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ME1P48163 572 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 NASPP49321 788 aaPredicted RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 DNM1Q05193 864 aaKnown RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 PTGDRQ13258 359 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ACVR2BQ13705 512 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ZNF174Q15697 407 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 AK8Q96MA6 479 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 PYM1Q9BRP8 204 aaKnown RBP11.55□□□□□ -0.56
CLPB-210ENST00000539148 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 SPC25Q9HBM1 224 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 FAM184BQ9ULE4 1060 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 ELP1O95163 1332 aa11.55□□□□□ -0.56
CLPB-210ENST00000539148 SPATA31C2B4DYI2 1134 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 SLC26A4O43511 780 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 GAS7O60861 476 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 PRPF40AO75400 957 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 TDP2O95551 362 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 TXNP10599 105 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 SFNP31947 248 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 GRK4P32298 578 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 TOB1P50616 345 aaPredicted RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 LBX1P52954 281 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 UBE2HP62256 183 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 MRPS9P82933 396 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 KRT76Q01546 638 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 CEBPZQ03701 1054 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 PDIA5Q14554 519 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 SEPT14Q6ZU15 432 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 OTOP1Q7RTM1 612 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 KCTD17Q8N5Z5 321 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 NPLOC4Q8TAT6 608 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 USP28Q96RU2 1077 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 ARHGAP39Q9C0H5 1083 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 RCOR1Q9UKL0 485 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 ZHX1Q9UKY1 873 aaPredicted RBP11.54□□□□□ -0.56
CLPB-210ENST00000539148 PCDHB6Q9Y5E3 794 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 NFASCO94856 1347 aa11.54□□□□□ -0.56
CLPB-210ENST00000539148 ZSWIM8A7E2V4 1837 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 IGLV3-22A0A075B6J6 115 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 FAM205CA6NFA0 338 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 FAM86B1E9PN63 330 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 CUTAO60888 179 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 FAM86B2P0C5J1 330 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 HSPA8P11142 646 aaKnown RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 AKR1A1P14550 325 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 ITGB5P18084 799 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 TXKP42681 527 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 JAK3P52333 1124 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 LAMC2Q13753 1193 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 FOXD4L6Q3SYB3 417 aaPredicted RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 EARS2Q5JPH6 523 aaKnown RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 HAUS3Q68CZ6 603 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 FOXD4L3Q6VB84 417 aaPredicted RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
CLPB-210ENST00000539148 LINC00301Q8NCQ3 95 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 NEK9Q8TD19 979 aa11.53□□□□□ -0.56
CLPB-210ENST00000539148 AP5M1Q9H0R1 490 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms