RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CYP2W1Q8TAV3 490 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 MBOAT7Q96N66 472 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 INPP4AQ96PE3 977 aaPredicted RBP19.53■□□□□ 0.72
CLN6-202ENST00000538696 MXRA8Q9BRK3 442 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 VTA1Q9NP79 307 aa19.53■□□□□ 0.72
CLN6-202ENST00000538696 IGLV3-22A0A075B6J6 115 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 SPTLC2O15270 562 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 STAM2O75886 525 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 ATP2B1P20020 1258 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 GRK4P32298 578 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 ZNF76P36508 570 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 TRAPPC10P48553 1259 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 TTC38Q5R3I4 469 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 PRAMEF19Q5SWL8 479 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 JADE2Q9NQC1 790 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 TMEM63CQ9P1W3 806 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 PCDHB6Q9Y5E3 794 aa19.52■□□□□ 0.72
CLN6-202ENST00000538696 CYP3A7-CYP3A51PA0A087WV96 503 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 SLC37A4O43826 429 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 ZNF865P0CJ78 1059 aaPredicted RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 CYBAP13498 195 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 CYP3A7P24462 503 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 ME1P48163 572 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 SEMA3FQ13275 785 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 ACVR2BQ13705 512 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 SLC39A14Q15043 492 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 CEP55Q53EZ4 464 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 TRPV1Q8NER1 839 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 LENG9Q96B70 501 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 NAP1L4Q99733 375 aaKnown RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 WDR11Q9BZH6 1224 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 ABHD16BQ9H3Z7 469 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 PDGFCQ9NRA1 345 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 ZHX1Q9UKY1 873 aaPredicted RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 PCDHA7Q9UN72 937 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 GOLGA6L4A6NEF3 574 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 MEIS1O00470 390 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 CCNT1O60563 726 aaKnown RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 INHAP05111 366 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 GCFC2P16383 781 aaKnown RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 LIG1P18858 919 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 CACNB2Q08289 660 aaPredicted RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 PRR16Q569H4 304 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 PPP4R3AQ6IN85 833 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 TAPT1Q6NXT6 567 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 FBXO46Q6PJ61 603 aaPredicted RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 SEPT14Q6ZU15 432 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 NLRX1Q86UT6 975 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 SH3TC2Q8TF17 1288 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 GPRASP2Q96D09 838 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 DDX25Q9UHL0 483 aaKnown RBP19.51■□□□□ 0.71
CLN6-202ENST00000538696 NRBP1Q9UHY1 535 aa19.51■□□□□ 0.71
CLN6-202ENST00000538696 RBM47A0AV96 593 aaKnown RBP19.5■□□□□ 0.71
CLN6-202ENST00000538696 ARP10275 920 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 PRKAR2AP13861 404 aaKnown RBP19.5■□□□□ 0.71
CLN6-202ENST00000538696 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
CLN6-202ENST00000538696 ICAM3P32942 547 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 SETQ01105 290 aaPredicted RBP19.5■□□□□ 0.71
CLN6-202ENST00000538696 ZNF174Q15697 407 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 GNPTABQ3T906 1256 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 Q4G0T1 1027 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 MAP3K21Q5TCX8 1036 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 PLA2G4DQ86XP0 818 aa19.5■□□□□ 0.71
CLN6-202ENST00000538696 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.5■□□□□ 0.71
CLN6-202ENST00000538696 ARIH2O95376 493 aa19.49■□□□□ 0.71
CLN6-202ENST00000538696 MCM7P33993 719 aa19.49■□□□□ 0.71
CLN6-202ENST00000538696 ADCYAP1R1P41586 468 aa19.49■□□□□ 0.71
CLN6-202ENST00000538696 MTMR1Q13613 665 aa19.49■□□□□ 0.71
CLN6-202ENST00000538696 PKN2Q16513 984 aaKnown RBP19.49■□□□□ 0.71
CLN6-202ENST00000538696 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
CLN6-202ENST00000538696 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.48■□□□□ 0.71
CLN6-202ENST00000538696 SPATA31C2B4DYI2 1134 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 PPP6R2O75170 966 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 CCND3P30281 292 aaPredicted RBP19.48■□□□□ 0.71
CLN6-202ENST00000538696 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
CLN6-202ENST00000538696 AXDND1Q5T1B0 1012 aaPredicted RBP19.48■□□□□ 0.71
CLN6-202ENST00000538696 TMEM63BQ5T3F8 832 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 SCFD2Q8WU76 684 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 TMEM60Q9H2L4 133 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 KCNH7Q9NS40 1196 aa19.48■□□□□ 0.71
CLN6-202ENST00000538696 WDR81Q562E7 1941 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 HTTP42858 3142 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 MSH4O15457 936 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 ADCY6O43306 1168 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 NEMFO60524 1076 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 CCDC144BQ3MJ40 725 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 ZSCAN23Q3MJ62 389 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 SLC9C1Q4G0N8 1177 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 FSIP1Q8NA03 581 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 ETNPPLQ8TBG4 499 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 UIMC1Q96RL1 719 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 AGO4Q9HCK5 861 aaKnown RBP19.47■□□□□ 0.71
CLN6-202ENST00000538696 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 CEP131Q9UPN4 1083 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 MRVI1Q9Y6F6 885 aa19.47■□□□□ 0.71
CLN6-202ENST00000538696 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms