RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
TCF4-206ENST00000537856 LENG1Q96BZ8 264 aaPredicted RBP12.18□□□□□ -0.46
TCF4-206ENST00000537856 MTIF3Q9H2K0 278 aaKnown RBP12.18□□□□□ -0.46
TCF4-206ENST00000537856 FIBPO43427 364 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
TCF4-206ENST00000537856 NAPAP54920 295 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.46
TCF4-206ENST00000537856 PCNX4Q63HM2 1172 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 CCDC62Q6P9F0 684 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 CXCL17Q6UXB2 119 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 CCDC148Q8NFR7 591 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
TCF4-206ENST00000537856 BRF1Q92994 677 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
TCF4-206ENST00000537856 MYH6P13533 1939 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 CPLX1O14810 134 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 PPFIA4O75335 1185 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 CDKL5O76039 1030 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 RXRAP19793 462 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 GNA11P29992 359 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 DDIT3P35638 169 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 ADCY7P51828 1080 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 NOD1Q9Y239 953 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 FRMPD4Q14CM0 1322 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 MYADML2A6NDP7 307 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 TIMP1P01033 207 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 ICAM3P32942 547 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 PURAQ00577 322 aaKnown RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 FPGSQ05932 587 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 RPUSD2Q8IZ73 545 aaKnown RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 PPTC7Q8NI37 304 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 ZNF274Q96GC6 653 aaPredicted RBP12.16□□□□□ -0.46
TCF4-206ENST00000537856 AGXT2Q9BYV1 514 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 PRO3102Q9H379 93 aa12.16□□□□□ -0.46
TCF4-206ENST00000537856 HTTP42858 3142 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 OPLAHO14841 1288 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 CTAGE5O15320 804 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 ADCY6O43306 1168 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
TCF4-206ENST00000537856 EVCP57679 992 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
TCF4-206ENST00000537856 LRIT3Q3SXY7 679 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 GPRASP2Q96D09 838 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 RNF26Q9BY78 433 aaPredicted RBP12.15□□□□□ -0.46
TCF4-206ENST00000537856 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 BARHL2Q9NY43 387 aa12.15□□□□□ -0.46
TCF4-206ENST00000537856 NID2Q14112 1375 aa12.15□□□□□ -0.47
TCF4-206ENST00000537856 PARNO95453 639 aaKnown RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 XBP1P17861 261 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 BFSP2Q13515 415 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 PFKFB3Q16875 520 aaPredicted RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 LY6KQ17RY6 165 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 CELF3Q5SZQ8 465 aaKnown RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 MFSD5Q6N075 450 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 SPATA33Q96N06 139 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 ESYT2A0FGR8 921 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 SMCO2A6NFE2 343 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 MEIS2O14770 477 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 PFKMP08237 780 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 MMP3P08254 477 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 SCG2P13521 617 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 C7orf31Q8N865 590 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 BADQ92934 168 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 ZNF215Q9UL58 517 aaPredicted RBP12.14□□□□□ -0.47
TCF4-206ENST00000537856 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
TCF4-206ENST00000537856 MCM3APO60318 1980 aa12.13□□□□□ -0.47
TCF4-206ENST00000537856 SPATA31C2B4DYI2 1134 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms