RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PANK4Q9NVE7 773 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 USP21Q9UK80 565 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 PCDHA12Q9UN75 941 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 COL4A3BPQ9Y5P4 624 aa15.86■□□□□ 0.13
USP44-203ENST00000537435 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 TRAF5O00463 557 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 RNF40O75150 1001 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 PRLRP16471 622 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 FKBP3Q00688 224 aaKnown RBP15.85■□□□□ 0.13
USP44-203ENST00000537435 GFPT1Q06210 699 aaPredicted RBP15.85■□□□□ 0.13
USP44-203ENST00000537435 CCDC40Q4G0X9 1142 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 ZCWPW2Q504Y3 356 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 FOXR2Q6PJQ5 311 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 LEKR1Q6ZMV7 388 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 MMGT1Q8N4V1 131 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 SELENOOQ9BVL4 669 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 FAM204AQ9H8W3 233 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
USP44-203ENST00000537435 ZBTB5O15062 677 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 TOM1O60784 492 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 RAD51AP2Q09MP3 1159 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 SEPT2Q15019 361 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 ASTE1Q2TB18 679 aaPredicted RBP15.85■□□□□ 0.13
USP44-203ENST00000537435 CCDC70Q6NSX1 233 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 NFRKBQ6P4R8 1299 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 ANKRD13CQ8N6S4 541 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 UIMC1Q96RL1 719 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 OSBPL9Q96SU4 736 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 HINFPQ9BQA5 517 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 FGFBP2Q9BYJ0 223 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 EDEM3Q9BZQ6 932 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 PSTPIP2Q9H939 334 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 NLRC4Q9NPP4 1024 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 TBC1D7Q9P0N9 293 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 SALL4Q9UJQ4 1053 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 HYOU1Q9Y4L1 999 aa15.85■□□□□ 0.13
USP44-203ENST00000537435 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 GCFC2P16383 781 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 HOXA10P31260 410 aaPredicted RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 SHMT1P34896 483 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 EZH2Q15910 746 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 ZNF572Q7Z3I7 529 aaPredicted RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 PSMB7Q99436 277 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 BMP2KQ9NSY1 1161 aaPredicted RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 USP40Q9NVE5 1235 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 LY75O60449 1722 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 SSU72P8A0A1W2PR75 194 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 E9PMD0 336 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 TULP2O00295 520 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 PJA2O43164 708 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 TCP1P17987 556 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 CXCR5P32302 372 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 RASSF7Q02833 373 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 HYIQ5T013 277 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 HGSNATQ68CP4 663 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 NELFCDQ8IXH7 590 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 CERS5Q8N5B7 392 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 SPATA4Q8NEY3 305 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 NT5C3AQ9H0P0 336 aa15.84■□□□□ 0.13
USP44-203ENST00000537435 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
USP44-203ENST00000537435 KDM3AQ9Y4C1 1321 aa15.83■□□□□ 0.13
USP44-203ENST00000537435 PRPF6O94906 941 aaKnown RBP15.83■□□□□ 0.12
USP44-203ENST00000537435 ITIH3Q06033 890 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 RIN2Q8WYP3 895 aaPredicted RBP15.83■□□□□ 0.12
USP44-203ENST00000537435 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 CRACR2AQ9BSW2 395 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 LRRC1Q9BTT6 524 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 KIAA1024Q9UPX6 916 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 NCK2O43639 380 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 SLURP2P0DP57 97 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 SLC1A4P43007 532 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
USP44-203ENST00000537435 HDAC7Q8WUI4 952 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 MTMR8Q96EF0 704 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 SMARCAL1Q9NZC9 954 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 CEP72Q9P209 647 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 SUGT1Q9Y2Z0 365 aa15.83■□□□□ 0.12
USP44-203ENST00000537435 NPHP3-ACAD11A0A0J9YXS1 232 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 BUB1O43683 1085 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 NOL4O94818 638 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 PLA2G4BP0C869 781 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP44-203ENST00000537435 SCNN1DP51172 638 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms