RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 IWS1Q96ST2 819 aa15□□□□□ -0.01
CHFR-210ENST00000535527 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
CHFR-210ENST00000535527 UPF3AQ9H1J1 476 aaKnown RBP15□□□□□ -0.01
CHFR-210ENST00000535527 PCDHA4Q9UN74 947 aa15□□□□□ -0.01
CHFR-210ENST00000535527 UBIAD1Q9Y5Z9 338 aa15□□□□□ -0.01
CHFR-210ENST00000535527 LTBP2Q14767 1821 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 TRIP12Q14669 1992 aaPredicted RBP14.99□□□□□ -0.01
CHFR-210ENST00000535527 IGLV3-22A0A075B6J6 115 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 FAM86B1E9PN63 330 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 FAM86B2P0C5J1 330 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 NLRP5P59047 1200 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 BEX3Q00994 111 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 ARHGAP1Q07960 439 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 BLIDQ8IZY5 108 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 SNX21Q969T3 373 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 LENG9Q96B70 501 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 UIMC1Q96RL1 719 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 WDR11Q9BZH6 1224 aa14.99□□□□□ -0.01
CHFR-210ENST00000535527 ATP9AO75110 1047 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 UBA1P22314 1058 aaKnown RBP14.98□□□□□ -0.01
CHFR-210ENST00000535527 CCND2P30279 289 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 MRPL12P52815 198 aaKnown RBP14.98□□□□□ -0.01
CHFR-210ENST00000535527 ARHGAP4P98171 946 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 TNFAIP2Q03169 654 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 AP3B2Q13367 1082 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 LRRC41Q15345 812 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 STXBP2Q15833 593 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 KLHDC9Q8NEP7 349 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 MAFAQ8NHW3 353 aaPredicted RBP14.98□□□□□ -0.01
CHFR-210ENST00000535527 CDX2Q99626 313 aaPredicted RBP14.98□□□□□ -0.01
CHFR-210ENST00000535527 C6orf50Q9HD87 102 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 XPNPEP3Q9NQH7 507 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 DDX41Q9UJV9 622 aaKnown RBP14.98□□□□□ -0.01
CHFR-210ENST00000535527 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
CHFR-210ENST00000535527 SPDYE3A6NKU9 549 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 BTBD18B2RXH4 712 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 K7ELQ4 463 aaPredicted RBP14.97□□□□□ -0.01
CHFR-210ENST00000535527 DUSP11O75319 330 aaKnown RBP14.97□□□□□ -0.01
CHFR-210ENST00000535527 EIF3JO75822 258 aaKnown RBP14.97□□□□□ -0.01
CHFR-210ENST00000535527 TDP2O95551 362 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 MMP1P03956 469 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 ARP10275 920 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 GJB2P29033 226 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 GJA9P57773 515 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 NKX3-2P78367 333 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 TLK2Q86UE8 772 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 PPP1R13LQ8WUF5 828 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 PRKAG2Q9UGJ0 569 aa14.97□□□□□ -0.01
CHFR-210ENST00000535527 KCNA2P16389 499 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 ICAM3P32942 547 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 MCM2P49736 904 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 DIS3L2Q8IYB7 885 aaKnown RBP14.96□□□□□ -0.01
CHFR-210ENST00000535527 CCDC12Q8WUD4 166 aaPredicted RBP14.96□□□□□ -0.01
CHFR-210ENST00000535527 GJA10Q969M2 543 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 SENP6Q9GZR1 1112 aaPredicted RBP14.96□□□□□ -0.01
CHFR-210ENST00000535527 PKD2L1Q9P0L9 805 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 SIP14410 1827 aa14.96□□□□□ -0.01
CHFR-210ENST00000535527 MUC3AQ02505 3323 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 ARID2Q68CP9 1835 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 SPATA31C2B4DYI2 1134 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 MSCO60682 206 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 CYP3A4P08684 503 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 TXNP10599 105 aaKnown RBP14.95□□□□□ -0.02
CHFR-210ENST00000535527 RARBP10826 455 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 GNA11P29992 359 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 ITGB3BPQ13352 177 aaPredicted RBP14.95□□□□□ -0.02
CHFR-210ENST00000535527 INF2Q27J81 1249 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 IQSEC1Q6DN90 963 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 FBXO18Q8NFZ0 1043 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 TBCKQ8TEA7 893 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 SCFD2Q8WU76 684 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 MXRA8Q9BRK3 442 aa14.95□□□□□ -0.02
CHFR-210ENST00000535527 DYNC1LI2O43237 492 aaPredicted RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 SLC37A4O43826 429 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 C6orf222P0C671 652 aaPredicted RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 CST5P28325 142 aaPredicted RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 SMAD3P84022 425 aaKnown RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 PIK3AP1Q6ZUJ8 805 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 C8orf76Q96K31 380 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 MRVI1Q9Y6F6 885 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 TTC28Q96AY4 2481 aa14.94□□□□□ -0.02
CHFR-210ENST00000535527 MYH9P35579 1960 aaKnown RBP14.94□□□□□ -0.02
CHFR-210ENST00000535527 GRIN2DO15399 1336 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 DNM1LO00429 736 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 MEIS1O00470 390 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 GGPS1O95749 300 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
CHFR-210ENST00000535527 CIITAP33076 1130 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 KRT2P35908 639 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 TTLL4Q14679 1199 aa14.93□□□□□ -0.02
CHFR-210ENST00000535527 HSDL1Q3SXM5 330 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms