RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 MYCLP12524 364 aaPredicted RBP21■□□□□ 0.95
UBXN1-216ENST00000533908 HOXD8P13378 290 aaPredicted RBP21■□□□□ 0.95
UBXN1-216ENST00000533908 COL9A1P20849 921 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 GRB10Q13322 594 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 MBTPS1Q14703 1052 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 MFSD10Q14728 455 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 SKIV2LQ15477 1246 aaKnown RBP21■□□□□ 0.95
UBXN1-216ENST00000533908 KIAA0753Q2KHM9 967 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 MYSM1Q5VVJ2 828 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 VSIG10LQ86VR7 867 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 CCDC155Q8N6L0 562 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 C7orf31Q8N865 590 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 PPTC7Q8NI37 304 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 BCAS3Q9H6U6 928 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 CNNM2Q9H8M5 875 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 ZBTB5O15062 677 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 GTPBP6O43824 516 aaPredicted RBP20.99■□□□□ 0.95
UBXN1-216ENST00000533908 PDE4AP27815 886 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 HSDL1Q3SXM5 330 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 ZNF618Q5T7W0 954 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 GPKOWQ92917 476 aaPredicted RBP eCLIP20.99■□□□□ 0.95
UBXN1-216ENST00000533908 PCDHA1Q9Y5I3 950 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 TAF6LQ9Y6J9 622 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 XIRP2A4UGR9 3374 aa20.99■□□□□ 0.95
UBXN1-216ENST00000533908 PTK7Q13308 1070 aa20.98■□□□□ 0.95
UBXN1-216ENST00000533908 CELF3Q5SZQ8 465 aaKnown RBP20.98■□□□□ 0.95
UBXN1-216ENST00000533908 CNKSR3Q6P9H4 555 aa20.98■□□□□ 0.95
UBXN1-216ENST00000533908 PIGSQ96S52 555 aa20.98■□□□□ 0.95
UBXN1-216ENST00000533908 CYTH3O43739 400 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 PPFIA4O75335 1185 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 GSPT1P15170 499 aaKnown RBP20.97■□□□□ 0.95
UBXN1-216ENST00000533908 KCNJ6P48051 423 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 PGM5Q15124 567 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 IL27Q8NEV9 243 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 C16orf70Q9BSU1 422 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 RIOX1Q9H6W3 641 aa20.97■□□□□ 0.95
UBXN1-216ENST00000533908 GGPS1O95749 300 aa20.96■□□□□ 0.95
UBXN1-216ENST00000533908 PTH1RQ03431 593 aa20.96■□□□□ 0.95
UBXN1-216ENST00000533908 GRM4Q14833 912 aa20.96■□□□□ 0.95
UBXN1-216ENST00000533908 HOMER1Q86YM7 354 aa20.96■□□□□ 0.95
UBXN1-216ENST00000533908 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
UBXN1-216ENST00000533908 KATNAL1Q9BW62 490 aa20.96■□□□□ 0.95
UBXN1-216ENST00000533908 MAP3K20Q9NYL2 800 aaKnown RBP20.96■□□□□ 0.95
UBXN1-216ENST00000533908 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
UBXN1-216ENST00000533908 ABHD14A-ACY1A0A1B0GW23 586 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 GJB5O95377 273 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 PARNO95453 639 aaKnown RBP20.95■□□□□ 0.94
UBXN1-216ENST00000533908 CYP21A2P08686 494 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 UBA1P22314 1058 aaKnown RBP20.95■□□□□ 0.94
UBXN1-216ENST00000533908 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.95■□□□□ 0.94
UBXN1-216ENST00000533908 FCHSD1Q86WN1 690 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 SPATA33Q96N06 139 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 ZBED2Q9BTP6 218 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 OSBPL7Q9BZF2 842 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 SUGCTQ9HAC7 445 aa20.95■□□□□ 0.94
UBXN1-216ENST00000533908 AAK1Q2M2I8 961 aa20.94■□□□□ 0.94
UBXN1-216ENST00000533908 KCNV1Q6PIU1 500 aa20.94■□□□□ 0.94
UBXN1-216ENST00000533908 SAMD3Q8N6K7 520 aa20.94■□□□□ 0.94
UBXN1-216ENST00000533908 RAD9AQ99638 391 aa20.94■□□□□ 0.94
UBXN1-216ENST00000533908 TELO2Q9Y4R8 837 aa20.94■□□□□ 0.94
UBXN1-216ENST00000533908 GCOM1H8Y6P7 765 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-216ENST00000533908 POLR2MP0CAP2 368 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 MRPS9P82933 396 aaKnown RBP20.93■□□□□ 0.94
UBXN1-216ENST00000533908 TROAPQ12815 778 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 MKRN4PQ13434 485 aaPredicted RBP20.93■□□□□ 0.94
UBXN1-216ENST00000533908 IKBKEQ14164 716 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 TTC22Q5TAA0 569 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 FAM117BQ6P1L5 589 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 SERINC5Q86VE9 423 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 GDPD5Q8WTR4 605 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 MTUS1Q9ULD2 1270 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 COG5Q9UP83 839 aa20.93■□□□□ 0.94
UBXN1-216ENST00000533908 LINC01553A4QN01 128 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
UBXN1-216ENST00000533908 LGR5O75473 907 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 TGFB3P10600 412 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 CCND2P30279 289 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 ERVK-21P61565 698 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 DBF4BQ8NFT6 615 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 HLA-CQ95604 372 aa20.92■□□□□ 0.94
UBXN1-216ENST00000533908 COL4A4P53420 1690 aaPredicted RBP20.92■□□□□ 0.94
UBXN1-216ENST00000533908 PNMA6FA0A0J9YX94 578 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 CHMLP26374 656 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 HOXC8P31273 242 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 THPOP40225 353 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 SEMA3FQ13275 785 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 MLXIPQ9HAP2 919 aa20.91■□□□□ 0.94
UBXN1-216ENST00000533908 E7EWF7 191 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 H3BRB1 525 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 TREHO43280 583 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 ANTXR2P58335 489 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 TRDNQ13061 729 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 RNPEPQ9H4A4 650 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 EPHX3Q9H6B9 360 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 TUT1Q9H6E5 874 aaKnown RBP20.9■□□□□ 0.94
UBXN1-216ENST00000533908 RTEL1Q9NZ71 1219 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 LMCD1Q9NZU5 365 aa20.9■□□□□ 0.94
UBXN1-216ENST00000533908 RSPH10B2B2RC85 870 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms