RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CHD7Q9P2D1 2997 aa14.34□□□□□ -0.11
CAPRIN1-213ENST00000533562 SLC27A2O14975 620 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 GGPS1O95749 300 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 ATP2A2P16615 1042 aaKnown RBP14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 LIFRP42702 1097 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 PSEN2P49810 448 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 MFSD10Q14728 455 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 NECTIN1Q15223 517 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 GNPTABQ3T906 1256 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 BMP2KLQ5H9B9 411 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 RNF20Q5VTR2 975 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 CREB3L3Q68CJ9 461 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 VWCEQ96DN2 955 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 GTF2IRD1Q9UHL9 959 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 PCDHA11Q9Y5I1 949 aa14.33□□□□□ -0.12
CAPRIN1-213ENST00000533562 SH2B2O14492 632 aaPredicted RBP14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 F2P00734 622 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 HOXD8P13378 290 aaPredicted RBP14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 SP2Q02086 613 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 KIAA0753Q2KHM9 967 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 IL31RAQ8NI17 732 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 PHOSPHO2Q8TCD6 241 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 MYL10Q9BUA6 226 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 MYH7BA7E2Y1 1941 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
CAPRIN1-213ENST00000533562 HAS3O00219 553 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 ZNF286BP0CG31 522 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 SELPP16109 830 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 UBA1P22314 1058 aaKnown RBP14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 RABGGTBP53611 331 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 NEDD9Q14511 834 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 SYNE3Q6ZMZ3 975 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 SLC9A7Q96T83 725 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 YBX2Q9Y2T7 364 aaKnown RBP14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
CAPRIN1-213ENST00000533562 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 NOP56O00567 594 aaKnown RBP14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 SORBS3O60504 671 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 ICAM3P32942 547 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 PTK7Q13308 1070 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 PPP2R2DQ66LE6 453 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 LRRC8DQ7L1W4 858 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 SRBD1Q8N5C6 995 aaKnown RBP14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 PSTPIP2Q9H939 334 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 FRMPD4Q14CM0 1322 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 TRANK1O15050 2925 aa14.3□□□□□ -0.12
CAPRIN1-213ENST00000533562 SPATA31C2B4DYI2 1134 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 H3BRB1 525 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 MEIS2O14770 477 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 FIBPO43427 364 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 CKBP12277 381 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 KCNJ6P48051 423 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 RBL2Q08999 1139 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 PCNX4Q63HM2 1172 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 METTL7BQ6UX53 244 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 NLRX1Q86UT6 975 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 SGMS1Q86VZ5 419 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 NEK1Q96PY6 1258 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 C16orf70Q9BSU1 422 aa14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 TUT1Q9H6E5 874 aaKnown RBP14.29□□□□□ -0.12
CAPRIN1-213ENST00000533562 MYOGP15173 224 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 RXRAP19793 462 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 IGFBP4P22692 258 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 CYFIP1Q7L576 1253 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 CCDC82Q8N4S0 544 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 GIMAP8Q8ND71 665 aaPredicted RBP14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 SENP7Q9BQF6 1050 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 COL25A1Q9BXS0 654 aaPredicted RBP14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
CAPRIN1-213ENST00000533562 TET1Q8NFU7 2136 aa14.27□□□□□ -0.12
CAPRIN1-213ENST00000533562 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 CXCL10P02778 98 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 GNAT1P11488 350 aa14.27□□□□□ -0.13
CAPRIN1-213ENST00000533562 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms