RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PTGS1P23219 599 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 MCM7P33993 719 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 RESTQ13127 1097 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 NBR1Q14596 966 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 FAM173BQ6P4H8 233 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 BRAPQ7Z569 592 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 COPS5Q92905 334 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 ARMC5Q96C12 935 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 GPRASP2Q96D09 838 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 IPO9Q96P70 1041 aaKnown RBP19.81■□□□□ 0.76
NXF1-216ENST00000533499 DEFB118Q96PH6 123 aa19.81■□□□□ 0.76
NXF1-216ENST00000533499 DDX39AO00148 427 aaKnown RBP19.8■□□□□ 0.76
NXF1-216ENST00000533499 MEIS1O00470 390 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 ARIH2O95376 493 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 RARBP10826 455 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 PDIA4P13667 645 aaKnown RBP19.8■□□□□ 0.76
NXF1-216ENST00000533499 SP4Q02446 784 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 KCNV1Q6PIU1 500 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 CDHR1Q96JP9 859 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 TMEM106CQ9BVX2 250 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 AP5M1Q9H0R1 490 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 KCNH7Q9NS40 1196 aa19.8■□□□□ 0.76
NXF1-216ENST00000533499 DDX20Q9UHI6 824 aaKnown RBP19.8■□□□□ 0.76
NXF1-216ENST00000533499 SPATA31C2B4DYI2 1134 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 WNT7AO00755 349 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 DYNC1LI2O43237 492 aaPredicted RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 EDIL3O43854 480 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 GGPS1O95749 300 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 F13A1P00488 732 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 GCFC2P16383 781 aaKnown RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 CIITAP33076 1130 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 SETQ01105 290 aaPredicted RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 RILPL1Q5EBL4 403 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 OR6J1Q8NGC5 347 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 ZNF577Q9BSK1 485 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 ZSCAN16Q9H4T2 348 aaPredicted RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 MLXIPQ9HAP2 919 aa19.79■□□□□ 0.76
NXF1-216ENST00000533499 DDX41Q9UJV9 622 aaKnown RBP19.79■□□□□ 0.76
NXF1-216ENST00000533499 IGLV3-22A0A075B6J6 115 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 RBM47A0AV96 593 aaKnown RBP19.78■□□□□ 0.76
NXF1-216ENST00000533499 ADCY6O43306 1168 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 SLC37A4O43826 429 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 GH1P01241 217 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 UBA1P22314 1058 aaKnown RBP19.78■□□□□ 0.76
NXF1-216ENST00000533499 ICAM3P32942 547 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 TRAPPC10P48553 1259 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 CEBPZQ03701 1054 aaKnown RBP19.78■□□□□ 0.76
NXF1-216ENST00000533499 SEMA3FQ13275 785 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 DUSP28Q4G0W2 176 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 MYSM1Q5VVJ2 828 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 MOXD1Q6UVY6 613 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 NIPA1Q7RTP0 329 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 TNS4Q8IZW8 715 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 GJA10Q969M2 543 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 SDF4Q9BRK5 362 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 AGO4Q9HCK5 861 aaKnown RBP19.78■□□□□ 0.76
NXF1-216ENST00000533499 XPNPEP3Q9NQH7 507 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 PCDHB6Q9Y5E3 794 aa19.78■□□□□ 0.76
NXF1-216ENST00000533499 DOCK5Q9H7D0 1870 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 CYP3A7-CYP3A51PA0A087WV96 503 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 NEMFO60524 1076 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 MSCO60682 206 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 ATP9AO75110 1047 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 PGK1P00558 417 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 C6orf222P0C671 652 aaPredicted RBP19.77■□□□□ 0.76
NXF1-216ENST00000533499 CYP3A7P24462 503 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 TOB1P50616 345 aaPredicted RBP19.77■□□□□ 0.76
NXF1-216ENST00000533499 SP2Q02086 613 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 NEDD9Q14511 834 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 CALCRLQ16602 461 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 Q4G0T1 1027 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 CCDC62Q6P9F0 684 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 CYFIP1Q7L576 1253 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 TLK2Q86UE8 772 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 SPC25Q9HBM1 224 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 TCEAL9Q9UHQ7 104 aa19.77■□□□□ 0.76
NXF1-216ENST00000533499 IPO5O00410 1097 aaKnown RBP19.76■□□□□ 0.75
NXF1-216ENST00000533499 MSH4O15457 936 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 MAFGO15525 162 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 DUSP11O75319 330 aaKnown RBP19.76■□□□□ 0.75
NXF1-216ENST00000533499 BAG4O95429 457 aaKnown RBP19.76■□□□□ 0.75
NXF1-216ENST00000533499 TFRCP02786 760 aaKnown RBP19.76■□□□□ 0.75
NXF1-216ENST00000533499 TGFB3P10600 412 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 NUCB2P80303 420 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 PPP4R3AQ6IN85 833 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 BCAS3Q9H6U6 928 aa19.76■□□□□ 0.75
NXF1-216ENST00000533499 NOP56O00567 594 aaKnown RBP19.75■□□□□ 0.75
NXF1-216ENST00000533499 NKRFO15226 690 aaKnown RBP eCLIP19.75■□□□□ 0.75
NXF1-216ENST00000533499 GAS7O60861 476 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 BRD1O95696 1058 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 LRCH2Q5VUJ6 765 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 GIMAP8Q8ND71 665 aaPredicted RBP19.75■□□□□ 0.75
NXF1-216ENST00000533499 LENG9Q96B70 501 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 SPATA33Q96N06 139 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 MBOAT7Q96N66 472 aa19.75■□□□□ 0.75
NXF1-216ENST00000533499 ZNF396Q96N95 335 aaPredicted RBP19.75■□□□□ 0.75
NXF1-216ENST00000533499 PAK6Q9NQU5 681 aaPredicted RBP19.75■□□□□ 0.75
NXF1-216ENST00000533499 ZDHHC9Q9Y397 364 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms