RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 EYSQ5T1H1 3165 aa21.87■■□□□ 1.09
SSH3-209ENST00000532600 DOCK5Q9H7D0 1870 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 PIK3CDO00329 1044 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 PSEN2P49810 448 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 GNAQP50148 359 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 HIC1Q14526 733 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 INPP4AQ96PE3 977 aaPredicted RBP21.86■■□□□ 1.09
SSH3-209ENST00000532600 HDAC6Q9UBN7 1215 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 BRPF3Q9ULD4 1205 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 TELO2Q9Y4R8 837 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 SLC12A7Q9Y666 1083 aa21.86■■□□□ 1.09
SSH3-209ENST00000532600 TRIP12Q14669 1992 aaPredicted RBP21.85■■□□□ 1.09
SSH3-209ENST00000532600 IQCF3P0C7M6 154 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 CALM1P0DP23 149 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 CALM2P0DP24 149 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 CALM3P0DP25 149 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 GPNMBQ14956 572 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 PTGISQ16647 500 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 KCNV1Q6PIU1 500 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 MICU3Q86XE3 530 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 CCDC82Q8N4S0 544 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 TIFAQ96CG3 184 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 SPATA33Q96N06 139 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 TET1Q8NFU7 2136 aa21.85■■□□□ 1.09
SSH3-209ENST00000532600 PITPNM1O00562 1244 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 TGFB3P10600 412 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 ICAM3P32942 547 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 FUT2Q10981 343 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 MFSD10Q14728 455 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 APOA5Q6Q788 366 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 DEFB128Q7Z7B8 93 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 RPUSD2Q8IZ73 545 aaKnown RBP21.84■■□□□ 1.09
SSH3-209ENST00000532600 KCNB2Q92953 911 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 C16orf70Q9BSU1 422 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 ALG1Q9BT22 464 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 RTEL1Q9NZ71 1219 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 SEC63Q9UGP8 760 aaKnown RBP21.84■■□□□ 1.09
SSH3-209ENST00000532600 GTF2IRD1Q9UHL9 959 aa21.84■■□□□ 1.09
SSH3-209ENST00000532600 YBX2Q9Y2T7 364 aaKnown RBP21.84■■□□□ 1.09
SSH3-209ENST00000532600 SPATA31C2B4DYI2 1134 aa21.83■■□□□ 1.09
SSH3-209ENST00000532600 PPFIA4O75335 1185 aa21.83■■□□□ 1.09
SSH3-209ENST00000532600 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
SSH3-209ENST00000532600 DHX32Q7L7V1 743 aaKnown RBP21.83■■□□□ 1.09
SSH3-209ENST00000532600 SMARCC2Q8TAQ2 1214 aa21.83■■□□□ 1.09
SSH3-209ENST00000532600 WNT8BQ93098 351 aa21.83■■□□□ 1.09
SSH3-209ENST00000532600 CNTNAP5Q8WYK1 1306 aa21.82■■□□□ 1.08
SSH3-209ENST00000532600 A0A0C4DFX4 3053 aa21.82■■□□□ 1.08
SSH3-209ENST00000532600 UNC80Q8N2C7 3258 aa21.82■■□□□ 1.08
SSH3-209ENST00000532600 ZNF200P98182 395 aaPredicted RBP21.82■■□□□ 1.08
SSH3-209ENST00000532600 UBE2SQ16763 222 aa21.82■■□□□ 1.08
SSH3-209ENST00000532600 PCNX4Q63HM2 1172 aa21.82■■□□□ 1.08
SSH3-209ENST00000532600 FAM217BQ9NTX9 383 aaPredicted RBP21.82■■□□□ 1.08
SSH3-209ENST00000532600 CPA1P15085 419 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 RABGGTBP53611 331 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 RBL2Q08999 1139 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 TRIM71Q2Q1W2 868 aaKnown RBP21.81■■□□□ 1.08
SSH3-209ENST00000532600 TYW1BQ6NUM6 668 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 TRAF7Q6Q0C0 670 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 PSTPIP2Q9H939 334 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 NOD1Q9Y239 953 aa21.81■■□□□ 1.08
SSH3-209ENST00000532600 CHD7Q9P2D1 2997 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 STAM2O75886 525 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 PFKMP08237 780 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 MYOGP15173 224 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 RFC2P35250 354 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 BFSP2Q13515 415 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 C7orf31Q8N865 590 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 RETREG2Q8NC44 543 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 CUL5Q93034 780 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 KATNAL1Q9BW62 490 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 MTIF3Q9H2K0 278 aaKnown RBP21.8■■□□□ 1.08
SSH3-209ENST00000532600 NKX2-4Q9H2Z4 354 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 MLXIPQ9HAP2 919 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 PTPRSQ13332 1948 aa21.8■■□□□ 1.08
SSH3-209ENST00000532600 FIBPO43427 364 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 LGALS2P05162 132 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 FOSL2P15408 326 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 TCTN1Q2MV58 587 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 GNPTABQ3T906 1256 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 WWC2Q6AWC2 1192 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 METTL7BQ6UX53 244 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 CYFIP1Q7L576 1253 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 MAFAQ8NHW3 353 aaPredicted RBP21.79■■□□□ 1.08
SSH3-209ENST00000532600 CAGE1Q8TC20 777 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 GPR20Q99678 358 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 SLC4A7Q9Y6M7 1214 aa21.79■■□□□ 1.08
SSH3-209ENST00000532600 ZBBXA8MT70 800 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 ATP9AO75110 1047 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 CKBP12277 381 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 ITGB5P18084 799 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 CDC27P30260 824 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 HOXC8P31273 242 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 HSPA4P34932 840 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 RAB30Q15771 203 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 XRRA1Q6P2D8 792 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 HEATR3Q7Z4Q2 680 aa21.78■■□□□ 1.08
SSH3-209ENST00000532600 AFAP1L1Q8TED9 768 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms