RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 TRMT44Q8IYL2 757 aaKnown RBP14.28□□□□□ -0.12
COPB1-208ENST00000532088 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
COPB1-208ENST00000532088 TRIM47Q96LD4 638 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
COPB1-208ENST00000532088 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
COPB1-208ENST00000532088 CCDC194A0A1B0GVG4 234 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 STAM2O75886 525 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 BRD1O95696 1058 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 EDNRBP24530 442 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 HOXA13P31271 388 aaPredicted RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 SREBF1P36956 1147 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 TRAPPC10P48553 1259 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.13
COPB1-208ENST00000532088 SWT1Q5T5J6 900 aaKnown RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 MAMDC4Q6UXC1 1216 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 DPP9Q86TI2 863 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 NOSTRINQ8IVI9 506 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 MORC4Q8TE76 937 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 RMDN3Q96TC7 470 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 NAP1L4Q99733 375 aaKnown RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 APBA2Q99767 749 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 PXMP2Q9NR77 195 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 COL20A1Q9P218 1284 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
COPB1-208ENST00000532088 CASP8AP2Q9UKL3 1982 aa14.27□□□□□ -0.13
COPB1-208ENST00000532088 LCTP09848 1927 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 ASB14A6NK59 587 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 COBLO75128 1261 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 CYP3A4P08684 503 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
COPB1-208ENST00000532088 CTCFP49711 727 aaPredicted RBP14.26□□□□□ -0.13
COPB1-208ENST00000532088 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
COPB1-208ENST00000532088 USP11P51784 963 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 NR5A1Q13285 461 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
COPB1-208ENST00000532088 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
COPB1-208ENST00000532088 JAKMIP3Q5VZ66 844 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 OLFML2BQ68BL8 750 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 CD99L2Q8TCZ2 262 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 FGD4Q96M96 766 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 SRRDQ9UH36 339 aa14.26□□□□□ -0.13
COPB1-208ENST00000532088 ZNFX1Q9P2E3 1918 aaKnown RBP14.25□□□□□ -0.13
COPB1-208ENST00000532088 SYNGAP1Q96PV0 1343 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 GOLGA8CPA6NN73 597 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 KIF28PB7ZC32 967 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 ADAMTS3O15072 1205 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 IGHA2P01877 340 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
COPB1-208ENST00000532088 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
COPB1-208ENST00000532088 CNTN2Q02246 1040 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 RESTQ13127 1097 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 ARHGEF16Q5VV41 709 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 FCHSD1Q86WN1 690 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 RASGRP4Q8TDF6 673 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 ARHGAP39Q9C0H5 1083 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 TMEM260Q9NX78 707 aa14.25□□□□□ -0.13
COPB1-208ENST00000532088 ASTN1O14525 1302 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 FOXN1O15353 648 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 F13A1P00488 732 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 PGK2P07205 417 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
COPB1-208ENST00000532088 CCND2P30279 289 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 CIITAP33076 1130 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 PGM5Q15124 567 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 RILPL1Q5EBL4 403 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 ATL3Q6DD88 541 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 PIK3AP1Q6ZUJ8 805 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 NIPA1Q7RTP0 329 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 NEK8Q86SG6 692 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 VSIG10LQ86VR7 867 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 TBCKQ8TEA7 893 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 NOL7Q9UMY1 257 aaKnown RBP14.24□□□□□ -0.13
COPB1-208ENST00000532088 ATP6V1DQ9Y5K8 247 aa14.24□□□□□ -0.13
COPB1-208ENST00000532088 PLXNA1Q9UIW2 1896 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 CYP3A7-CYP3A51PA0A087WV96 503 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 NR3C2P08235 984 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 EIF2AK2P19525 551 aaKnown RBP14.23□□□□□ -0.13
COPB1-208ENST00000532088 CYP3A7P24462 503 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 FLT3LGP49771 235 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 ARHGAP4P98171 946 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 CAP1Q01518 475 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 PRKCZQ05513 592 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 STXBP2Q15833 593 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 NPLOC4Q8TAT6 608 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 MBOAT7Q96N66 472 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 KDM4CQ9H3R0 1056 aa14.23□□□□□ -0.13
COPB1-208ENST00000532088 ZSWIM8A7E2V4 1837 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms