RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 GPATCH3Q96I76 525 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 DDX41Q9UJV9 622 aaKnown RBP10.53□□□□□ -0.72
USF1-210ENST00000531842 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 DMDP11532 3685 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 PLXNA4Q9HCM2 1894 aa10.53□□□□□ -0.72
USF1-210ENST00000531842 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.52□□□□□ -0.73
USF1-210ENST00000531842 HAS3O00219 553 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 RGS20O76081 388 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 FGAP02671 866 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 ALADP13716 330 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 SP2Q02086 613 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 PTK7Q13308 1070 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 CDC37Q16543 378 aaPredicted RBP10.52□□□□□ -0.73
USF1-210ENST00000531842 DGKDQ16760 1214 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 HSDL1Q3SXM5 330 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 RPAINQ86UA6 219 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 DHX37Q8IY37 1157 aaKnown RBP10.52□□□□□ -0.73
USF1-210ENST00000531842 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 SP7Q8TDD2 431 aaPredicted RBP10.52□□□□□ -0.73
USF1-210ENST00000531842 SNX27Q96L92 541 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 RMDN3Q96TC7 470 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 FAM86C1Q9NVL1 165 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 INSL6Q9Y581 213 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 NEDD4P46934 1319 aa10.52□□□□□ -0.73
USF1-210ENST00000531842 LOC102724159A0A0B4J2E5 919 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 RSPH10B2B2RC85 870 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 H3BNC9 293 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 OPLAHO14841 1288 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 GRM6O15303 877 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 TREHO43280 583 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 F2P00734 622 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 AMHP03971 560 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 FGRP09769 529 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 RSPH10BP0C881 870 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 SNHG28P0DPA3 235 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 MYCLP12524 364 aaPredicted RBP10.51□□□□□ -0.73
USF1-210ENST00000531842 HYAL1Q12794 435 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 PWP2Q15269 919 aaKnown RBP10.51□□□□□ -0.73
USF1-210ENST00000531842 ADGRF4Q8IZF3 695 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 PABPC5Q96DU9 382 aaKnown RBP10.51□□□□□ -0.73
USF1-210ENST00000531842 YME1L1Q96TA2 773 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 PCDHB15Q9Y5E8 787 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 MRVI1Q9Y6F6 885 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 WDR19Q8NEZ3 1342 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 CACNA1HO95180 2353 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 WDR87Q6ZQQ6 2873 aa10.51□□□□□ -0.73
USF1-210ENST00000531842 TBX10O75333 385 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 NR3C2P08235 984 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 LINC00271P0C7V0 271 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
USF1-210ENST00000531842 STXBP2Q15833 593 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 QRICH1Q2TAL8 776 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 PLEKHG4Q58EX7 1191 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 ARHGEF16Q5VV41 709 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 FBXO11Q86XK2 927 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 RNF135Q8IUD6 432 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 ADHFE1Q8IWW8 467 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 NSUN6Q8TEA1 469 aaKnown RBP10.5□□□□□ -0.73
USF1-210ENST00000531842 C16orf70Q9BSU1 422 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 NSUN3Q9H649 340 aaKnown RBP10.5□□□□□ -0.73
USF1-210ENST00000531842 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 PCDHGC5Q9Y5F6 944 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 PLXNA3P51805 1871 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 TTC41PQ6P2S7 1318 aa10.5□□□□□ -0.73
USF1-210ENST00000531842 MBTPS2O43462 519 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 PPP1R11O60927 126 aaPredicted RBP10.49□□□□□ -0.73
USF1-210ENST00000531842 GGPS1O95749 300 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 CFBP00751 764 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 MX1P20591 662 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 CTNNB1P35222 781 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 NMIQ13287 307 aaPredicted RBP10.49□□□□□ -0.73
USF1-210ENST00000531842 TIGD5Q53EQ6 642 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 SERINC5Q86VE9 423 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 TRIM50Q86XT4 487 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 PPTC7Q8NI37 304 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 ATP6V0A1Q93050 837 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 TOP1MTQ969P6 601 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 SPATA33Q96N06 139 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 MPHOSPH6Q99547 160 aaKnown RBP10.49□□□□□ -0.73
USF1-210ENST00000531842 IFIH1Q9BYX4 1025 aaKnown RBP10.49□□□□□ -0.73
USF1-210ENST00000531842 ALG13Q9NP73 1137 aaKnown RBP10.49□□□□□ -0.73
USF1-210ENST00000531842 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
USF1-210ENST00000531842 TTC3P53804 2025 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 MYO10Q9HD67 2058 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 C17orf102A2RUQ5 167 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 DHX16O60231 1041 aaKnown RBP10.48□□□□□ -0.73
USF1-210ENST00000531842 SMIM10L2AP0DMW4 78 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms