RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 MAD2L2Q9UI95 211 aa24.47■■□□□ 1.51
FDFT1-220ENST00000531733 KIF28PB7ZC32 967 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 MYCLP12524 364 aaPredicted RBP24.46■■□□□ 1.51
FDFT1-220ENST00000531733 SP2Q02086 613 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 IFIT1BQ5T764 474 aaKnown RBP24.46■■□□□ 1.51
FDFT1-220ENST00000531733 CNKSR3Q6P9H4 555 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 EXOC6Q8TAG9 804 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 GDPD5Q8WTR4 605 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 UBAC1Q9BSL1 405 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 KRT23Q9C075 422 aa24.46■■□□□ 1.51
FDFT1-220ENST00000531733 KLRF2D3W0D1 207 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 LAMC2Q13753 1193 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 HSDL1Q3SXM5 330 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 ZNF618Q5T7W0 954 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 DHX37Q8IY37 1157 aaKnown RBP24.45■■□□□ 1.5
FDFT1-220ENST00000531733 BCAS3Q9H6U6 928 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 SENP2Q9HC62 589 aa24.45■■□□□ 1.5
FDFT1-220ENST00000531733 HOXD8P13378 290 aaPredicted RBP24.44■■□□□ 1.5
FDFT1-220ENST00000531733 PTK7Q13308 1070 aa24.44■■□□□ 1.5
FDFT1-220ENST00000531733 MYSM1Q5VVJ2 828 aa24.44■■□□□ 1.5
FDFT1-220ENST00000531733 STOX1Q6ZVD7 989 aa24.44■■□□□ 1.5
FDFT1-220ENST00000531733 CTNNA3Q9UI47 895 aa24.44■■□□□ 1.5
FDFT1-220ENST00000531733 PCDHA1Q9Y5I3 950 aa24.44■■□□□ 1.5
FDFT1-220ENST00000531733 PALM3A6NDB9 673 aaPredicted RBP24.43■■□□□ 1.5
FDFT1-220ENST00000531733 HIP1O00291 1037 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 ZBTB5O15062 677 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 AAMPQ13685 434 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 PGM5Q15124 567 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 CELF3Q5SZQ8 465 aaKnown RBP24.43■■□□□ 1.5
FDFT1-220ENST00000531733 VSIG10LQ86VR7 867 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 ZBED2Q9BTP6 218 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 CNNM2Q9H8M5 875 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 MTUS1Q9ULD2 1270 aa24.43■■□□□ 1.5
FDFT1-220ENST00000531733 BAZ2BQ9UIF8 2168 aaKnown RBP24.42■■□□□ 1.5
FDFT1-220ENST00000531733 GJB5O95377 273 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 GGPS1O95749 300 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 AAK1Q2M2I8 961 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 FAM117BQ6P1L5 589 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 HOMER1Q86YM7 354 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 KATNAL1Q9BW62 490 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 TAF6LQ9Y6J9 622 aa24.42■■□□□ 1.5
FDFT1-220ENST00000531733 UBA1P22314 1058 aaKnown RBP24.41■■□□□ 1.5
FDFT1-220ENST00000531733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.41■■□□□ 1.51e-38■■■■■ 47.4
FDFT1-220ENST00000531733 SPATA33Q96N06 139 aa24.41■■□□□ 1.5
FDFT1-220ENST00000531733 PIGSQ96S52 555 aa24.41■■□□□ 1.5
FDFT1-220ENST00000531733 C16orf70Q9BSU1 422 aa24.41■■□□□ 1.5
FDFT1-220ENST00000531733 ABHD14A-ACY1A0A1B0GW23 586 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 LINC01553A4QN01 128 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 CYTH3O43739 400 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 GSPT1P15170 499 aaKnown RBP24.4■■□□□ 1.5
FDFT1-220ENST00000531733 PDE4AP27815 886 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 OSBPL7Q9BZF2 842 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 SUGCTQ9HAC7 445 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 COG5Q9UP83 839 aa24.4■■□□□ 1.5
FDFT1-220ENST00000531733 PPFIA4O75335 1185 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 PARNO95453 639 aaKnown RBP24.39■■□□□ 1.49
FDFT1-220ENST00000531733 MKRN4PQ13434 485 aaPredicted RBP24.39■■□□□ 1.49
FDFT1-220ENST00000531733 GRM4Q14833 912 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 FCHSD1Q86WN1 690 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 HLA-CQ95604 372 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 RAD9AQ99638 391 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 TELO2Q9Y4R8 837 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 BRWD1Q9NSI6 2320 aa24.39■■□□□ 1.49
FDFT1-220ENST00000531733 ERVK-21P61565 698 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 PTH1RQ03431 593 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 IKBKEQ14164 716 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 SERINC5Q86VE9 423 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 KHSRPQ92945 711 aaKnown RBP eCLIP24.38■■□□□ 1.492e-7■■□□□ 12.9
FDFT1-220ENST00000531733 EPHX3Q9H6B9 360 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 RIOX1Q9H6W3 641 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 SIP14410 1827 aa24.38■■□□□ 1.49
FDFT1-220ENST00000531733 LGR5O75473 907 aa24.37■■□□□ 1.49
FDFT1-220ENST00000531733 CYP21A2P08686 494 aa24.37■■□□□ 1.49
FDFT1-220ENST00000531733 DBF4BQ8NFT6 615 aa24.37■■□□□ 1.49
FDFT1-220ENST00000531733 YTHDC1Q96MU7 727 aaKnown RBP24.37■■□□□ 1.49
FDFT1-220ENST00000531733 MAP3K20Q9NYL2 800 aaKnown RBP24.37■■□□□ 1.49
FDFT1-220ENST00000531733 DOCK5Q9H7D0 1870 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 MICAL3Q7RTP6 2002 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 GCOM1H8Y6P7 765 aaPredicted RBP24.36■■□□□ 1.49
FDFT1-220ENST00000531733 POLR2MP0CAP2 368 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 CCND2P30279 289 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 THPOP40225 353 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 MRPS9P82933 396 aaKnown RBP24.36■■□□□ 1.49
FDFT1-220ENST00000531733 SEMA3FQ13275 785 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 KCNV1Q6PIU1 500 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 TGS1Q96RS0 853 aaKnown RBP24.36■■□□□ 1.49
FDFT1-220ENST00000531733 C17orf80Q9BSJ5 609 aa24.36■■□□□ 1.49
FDFT1-220ENST00000531733 TREHO43280 583 aa24.35■■□□□ 1.49
FDFT1-220ENST00000531733 HOXC8P31273 242 aa24.35■■□□□ 1.49
FDFT1-220ENST00000531733 PIBF1Q8WXW3 757 aa24.35■■□□□ 1.49
FDFT1-220ENST00000531733 MLXIPQ9HAP2 919 aa24.35■■□□□ 1.49
FDFT1-220ENST00000531733 RSPH10B2B2RC85 870 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 IFIT3O14879 490 aaKnown RBP24.34■■□□□ 1.49
FDFT1-220ENST00000531733 LGALS2P05162 132 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 RSPH10BP0C881 870 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 SMIM10L2AP0DMW4 78 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 SMIM10L2BP0DMW5 78 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 TROAPQ12815 778 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 TTC22Q5TAA0 569 aa24.34■■□□□ 1.49
FDFT1-220ENST00000531733 SAMD3Q8N6K7 520 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms