RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 PIBF1Q8WXW3 757 aa19.46■□□□□ 0.71
CPSF1-207ENST00000531727 DHX38Q92620 1227 aaKnown RBP19.46■□□□□ 0.71
CPSF1-207ENST00000531727 SPATA33Q96N06 139 aa19.46■□□□□ 0.71
CPSF1-207ENST00000531727 SLC9A7Q96T83 725 aa19.46■□□□□ 0.71
CPSF1-207ENST00000531727 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
CPSF1-207ENST00000531727 TRIP12Q14669 1992 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-207ENST00000531727 PRC1O43663 620 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 BAIAP3O94812 1187 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 SELPP16109 830 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 SMARCA1P28370 1054 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 LRRC8DQ7L1W4 858 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 PHOSPHO2Q8TCD6 241 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 ZFP91Q96JP5 570 aaPredicted RBP19.45■□□□□ 0.7
CPSF1-207ENST00000531727 ESYT1Q9BSJ8 1104 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 MYL10Q9BUA6 226 aa19.45■□□□□ 0.7
CPSF1-207ENST00000531727 CHD7Q9P2D1 2997 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 SORBS3O60504 671 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 STAM2O75886 525 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 MCM5P33992 734 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.7
CPSF1-207ENST00000531727 RRP36Q96EU6 259 aaKnown RBP19.44■□□□□ 0.7
CPSF1-207ENST00000531727 TMEM87BQ96K49 555 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
CPSF1-207ENST00000531727 SH2B2O14492 632 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-207ENST00000531727 SLC27A2O14975 620 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 PARNO95453 639 aaKnown RBP19.43■□□□□ 0.7
CPSF1-207ENST00000531727 CKBP12277 381 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 IGFBP4P22692 258 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 MRPS9P82933 396 aaKnown RBP19.43■□□□□ 0.7
CPSF1-207ENST00000531727 PTK7Q13308 1070 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 GPNMBQ14956 572 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 GNPTABQ3T906 1256 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 NFXL1Q6ZNB6 911 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 PPM1EQ8WY54 764 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 MLXIPQ9HAP2 919 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 TET1Q8NFU7 2136 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 PTPRSQ13332 1948 aa19.43■□□□□ 0.7
CPSF1-207ENST00000531727 CCDC69A6NI79 296 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 CXCL10P02778 98 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 CA3P07451 260 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 ICAM3P32942 547 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 GNAQP50148 359 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 NECTIN1Q15223 517 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 CREB3L3Q68CJ9 461 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 HERC6Q8IVU3 1022 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 INPP4AQ96PE3 977 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-207ENST00000531727 C16orf70Q9BSU1 422 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 PRDM6Q9NQX0 595 aa19.42■□□□□ 0.7
CPSF1-207ENST00000531727 SEC63Q9UGP8 760 aaKnown RBP19.42■□□□□ 0.7
CPSF1-207ENST00000531727 PIK3CDO00329 1044 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 PLEKHA8P1O95397 391 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 LIFRP42702 1097 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 KCNJ6P48051 423 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 COL9A3Q14050 684 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-207ENST00000531727 TRIM71Q2Q1W2 868 aaKnown RBP19.41■□□□□ 0.7
CPSF1-207ENST00000531727 CNKSR3Q6P9H4 555 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 SRBD1Q8N5C6 995 aaKnown RBP19.41■□□□□ 0.7
CPSF1-207ENST00000531727 SMARCC2Q8TAQ2 1214 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 SYMPKQ92797 1274 aaKnown RBP19.41■□□□□ 0.7
CPSF1-207ENST00000531727 CUL5Q93034 780 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 BCAS3Q9H6U6 928 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 VCANP13611 3396 aa19.41■□□□□ 0.7
CPSF1-207ENST00000531727 SPTBN5Q9NRC6 3674 aaKnown RBP19.4■□□□□ 0.7
CPSF1-207ENST00000531727 SPATA31C2B4DYI2 1134 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 KIF28PB7ZC32 967 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 FIBPO43427 364 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 NBNO60934 754 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 CALM1P0DP23 149 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 CALM2P0DP24 149 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 CALM3P0DP25 149 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 WDR5P61964 334 aaKnown RBP19.4■□□□□ 0.7
CPSF1-207ENST00000531727 ZNF200P98182 395 aaPredicted RBP19.4■□□□□ 0.7
CPSF1-207ENST00000531727 SEMA3FQ13275 785 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 NEDD9Q14511 834 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 HIC1Q14526 733 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 XRRA1Q6P2D8 792 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 USP17L6PQ6QN14 398 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 WNT8BQ93098 351 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 ANO2Q9NQ90 1003 aa19.4■□□□□ 0.7
CPSF1-207ENST00000531727 DOCK5Q9H7D0 1870 aa19.39■□□□□ 0.7
CPSF1-207ENST00000531727 H3BRB1 525 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 NOP56O00567 594 aaKnown RBP19.39■□□□□ 0.69
CPSF1-207ENST00000531727 MEIS2O14770 477 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 LGALS2P05162 132 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 RXRAP19793 462 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 CCDC85BQ15834 202 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-207ENST00000531727 BMP2KLQ5H9B9 411 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 TJAP1Q5JTD0 557 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 ZNF618Q5T7W0 954 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 PCNX4Q63HM2 1172 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 TRAF7Q6Q0C0 670 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 METTL7BQ6UX53 244 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 TUT1Q9H6E5 874 aaKnown RBP19.39■□□□□ 0.69
CPSF1-207ENST00000531727 RTEL1Q9NZ71 1219 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 CUL9Q8IWT3 2517 aa19.39■□□□□ 0.69
CPSF1-207ENST00000531727 HOXC8P31273 242 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 CYFIP1Q7L576 1253 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 SERINC5Q86VE9 423 aa19.38■□□□□ 0.69
CPSF1-207ENST00000531727 CMTR1Q8N1G2 835 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms