RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SETQ01105 290 aaPredicted RBP19.23■□□□□ 0.67
SF3B2-211ENST00000531041 SEMA3FQ13275 785 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 MTMR1Q13613 665 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 TTLL4Q14679 1199 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 Q4G0T1 1027 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 PLA2G4DQ86XP0 818 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 LENG9Q96B70 501 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 ZNF333Q96JL9 665 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 KCNH7Q9NS40 1196 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 FAM184BQ9ULE4 1060 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
SF3B2-211ENST00000531041 WNT7AO00755 349 aa19.22■□□□□ 0.67
SF3B2-211ENST00000531041 F13A1P00488 732 aa19.22■□□□□ 0.67
SF3B2-211ENST00000531041 NUCB2P80303 420 aa19.22■□□□□ 0.67
SF3B2-211ENST00000531041 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
SF3B2-211ENST00000531041 PRR16Q569H4 304 aa19.22■□□□□ 0.67
SF3B2-211ENST00000531041 MYSM1Q5VVJ2 828 aa19.22■□□□□ 0.67
SF3B2-211ENST00000531041 DDX25Q9UHL0 483 aaKnown RBP19.22■□□□□ 0.67
SF3B2-211ENST00000531041 DDX41Q9UJV9 622 aaKnown RBP19.22■□□□□ 0.67
SF3B2-211ENST00000531041 ARP10275 920 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 TXNP10599 105 aaKnown RBP19.21■□□□□ 0.67
SF3B2-211ENST00000531041 CNGA1P29973 690 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 DUSP28Q4G0W2 176 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 TTC38Q5R3I4 469 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 SENP7Q9BQF6 1050 aa19.21■□□□□ 0.67
SF3B2-211ENST00000531041 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
SF3B2-211ENST00000531041 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.2■□□□□ 0.66
SF3B2-211ENST00000531041 NKRFO15226 690 aaKnown RBP eCLIP19.2■□□□□ 0.66
SF3B2-211ENST00000531041 ADCY6O43306 1168 aa19.2■□□□□ 0.66
SF3B2-211ENST00000531041 SLC37A4O43826 429 aa19.2■□□□□ 0.66
SF3B2-211ENST00000531041 ARIH2O95376 493 aa19.2■□□□□ 0.66
SF3B2-211ENST00000531041 SMPD1P17405 629 aa19.2■□□□□ 0.66
SF3B2-211ENST00000531041 ATP2B1P20020 1258 aa19.2■□□□□ 0.66
SF3B2-211ENST00000531041 FOXD4L5Q5VV16 416 aaPredicted RBP19.2■□□□□ 0.66
SF3B2-211ENST00000531041 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
SF3B2-211ENST00000531041 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.2■□□□□ 0.66
SF3B2-211ENST00000531041 MSCO60682 206 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 DUSP11O75319 330 aaKnown RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 CCL5P13501 91 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 KCNA2P16389 499 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 MCM7P33993 719 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 SP2Q02086 613 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 MTFR1Q15390 333 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 LY6KQ17RY6 165 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 TMEM63BQ5T3F8 832 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 GIMAP8Q8ND71 665 aaPredicted RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 UNC93B1Q9H1C4 597 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 AGO4Q9HCK5 861 aaKnown RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 PAK6Q9NQU5 681 aaPredicted RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 DDX20Q9UHI6 824 aaKnown RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 GNEQ9Y223 722 aaKnown RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 Q9Y3F1 56 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
SF3B2-211ENST00000531041 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
SF3B2-211ENST00000531041 IPO5O00410 1097 aaKnown RBP19.18■□□□□ 0.66
SF3B2-211ENST00000531041 TBX3O15119 743 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 NEMFO60524 1076 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 ATP9AO75110 1047 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 NEDD9Q14511 834 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 NBR1Q14596 966 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 ZNF174Q15697 407 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 COL13A1Q5TAT6 717 aaPredicted RBP19.18■□□□□ 0.66
SF3B2-211ENST00000531041 ETNPPLQ8TBG4 499 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 KCNMB3Q9NPA1 279 aa19.18■□□□□ 0.66
SF3B2-211ENST00000531041 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.18■□□□□ 0.66
SF3B2-211ENST00000531041 MSH4O15457 936 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 RARBP10826 455 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 UBA1P22314 1058 aaKnown RBP19.17■□□□□ 0.66
SF3B2-211ENST00000531041 FAM173BQ6P4H8 233 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 FAM20AQ96MK3 541 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 ZNF577Q9BSK1 485 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 NFASCO94856 1347 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 GH1P01241 217 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 CELF3Q5SZQ8 465 aaKnown RBP19.17■□□□□ 0.66
SF3B2-211ENST00000531041 GJC2Q5T442 439 aaPredicted RBP19.17■□□□□ 0.66
SF3B2-211ENST00000531041 LHX8Q68G74 356 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 SLC5A5Q92911 643 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 EMID1Q96A84 441 aaPredicted RBP19.17■□□□□ 0.66
SF3B2-211ENST00000531041 TBC1D22BQ9NU19 505 aa19.17■□□□□ 0.66
SF3B2-211ENST00000531041 DHX15O43143 795 aaKnown RBP19.16■□□□□ 0.66
SF3B2-211ENST00000531041 GGPS1O95749 300 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 MYCP01106 439 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-211ENST00000531041 NKX3-2P78367 333 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 ARHGAP1Q07960 439 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 ITGB3BPQ13352 177 aaPredicted RBP19.16■□□□□ 0.66
SF3B2-211ENST00000531041 LAMC2Q13753 1193 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 CALCRLQ16602 461 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 ANO1Q5XXA6 986 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 METTL7BQ6UX53 244 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 TLK2Q86UE8 772 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 DHX37Q8IY37 1157 aaKnown RBP19.16■□□□□ 0.66
SF3B2-211ENST00000531041 SLFN12Q8IYM2 578 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 C4orf32Q8N8J7 132 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 HAS1Q92839 578 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 COPS5Q92905 334 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 LENG1Q96BZ8 264 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms