RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 SAMD15Q9P1V8 674 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 ARHGAP20Q9P2F6 1191 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 PNMA3Q9UL41 463 aa15.51■□□□□ 0.07
PCF11-204ENST00000530660 ATP6V1G1O75348 118 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 FTCDO95954 541 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 SP100P23497 879 aaPredicted RBP15.5■□□□□ 0.07
PCF11-204ENST00000530660 IFNAR2P48551 515 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 ITIH4Q14624 930 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 MYBPC3Q14896 1274 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 C2CD5Q86YS7 1000 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 MTRQ99707 1265 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 INCENPQ9NQS7 918 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 NWD2Q9ULI1 1742 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 STAT6P42226 847 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 CCNG1P51959 295 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 KIF11P52732 1056 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 MRPS35P82673 323 aaKnown RBP15.5■□□□□ 0.07
PCF11-204ENST00000530660 ATP11AP98196 1134 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 RNASELQ05823 741 aaKnown RBP15.5■□□□□ 0.07
PCF11-204ENST00000530660 LPIN2Q92539 896 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 AATFQ9NY61 560 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCF11-204ENST00000530660 CPDO75976 1380 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 GOLGA8AA7E2F4 631 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 ZBTB43O43298 467 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 RASSF7Q02833 373 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 LRRC24Q50LG9 513 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 AGBL2Q5U5Z8 902 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 FOXB2Q5VYV0 432 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 LMNTD2Q8IXW0 634 aa15.5■□□□□ 0.07
PCF11-204ENST00000530660 ZNF594Q96JF6 807 aaPredicted RBP15.5■□□□□ 0.07
PCF11-204ENST00000530660 RGPD2P0DJD1 1756 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 BCL9LQ86UU0 1499 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 ZNF213O14771 459 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 NKRFO15226 690 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCF11-204ENST00000530660 SART1O43290 800 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 EIF4A3P38919 411 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 MAIP1Q8WWC4 291 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 PUS7LQ9H0K6 701 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 ASAP2O43150 1006 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 AKR1B10O60218 316 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 SSRP1Q08945 709 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 DNAJC14Q6Y2X3 702 aaPredicted RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 RBM17Q96I25 401 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 LRRC42Q9Y546 428 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCF11-204ENST00000530660 LMO7Q8WWI1 1683 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
PCF11-204ENST00000530660 PDS5AQ29RF7 1337 aaKnown RBP15.49■□□□□ 0.07
PCF11-204ENST00000530660 WNT7AO00755 349 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 HIP1RO75146 1068 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 KIFAP3Q92845 792 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 PRMT1Q99873 361 aaKnown RBP15.48■□□□□ 0.07
PCF11-204ENST00000530660 PREBQ9HCU5 417 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 ECM29Q5VYK3 1845 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 RAD23BP54727 409 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 AMOTQ4VCS5 1084 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 UCMAQ8WVF2 138 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 LRRC45Q96CN5 670 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 MMTAG2Q9BU76 263 aaKnown RBP15.48■□□□□ 0.07
PCF11-204ENST00000530660 ISCUQ9H1K1 167 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 ABCF2Q9UG63 623 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 B4E1Z4 1266 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 SRGNP10124 158 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 DNM2P50570 870 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 SEPT2Q15019 361 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 YIPF2Q9BWQ6 316 aa15.48■□□□□ 0.07
PCF11-204ENST00000530660 SMIM23A6NLE4 172 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 H7C1D1 291 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 CREB3O43889 395 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 MAGEA1P43355 309 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 COPS2P61201 443 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 KLC1Q07866 573 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 ACBD5Q5T8D3 534 aaPredicted RBP15.47■□□□□ 0.07
PCF11-204ENST00000530660 ATXN2LQ8WWM7 1075 aaKnown RBP15.47■□□□□ 0.07
PCF11-204ENST00000530660 FGD4Q96M96 766 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 EXOC1Q9NV70 894 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 STK36Q9NRP7 1315 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 LTN1O94822 1766 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 ZNF790Q6PG37 636 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 TRIM42Q8IWZ5 723 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 TUBGCP2Q9BSJ2 902 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 ARHGEF3Q9NR81 526 aa15.47■□□□□ 0.07
PCF11-204ENST00000530660 OATP04181 439 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 GNAZP19086 355 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 GFPT1Q06210 699 aaPredicted RBP15.46■□□□□ 0.07
PCF11-204ENST00000530660 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.07
PCF11-204ENST00000530660 DBN1Q16643 649 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 EARS2Q5JPH6 523 aaKnown RBP15.46■□□□□ 0.07
PCF11-204ENST00000530660 TBC1D10CQ8IV04 446 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 BICD1Q96G01 975 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 GALNT8Q9NY28 637 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 TNRQ92752 1358 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 EPHB6O15197 1021 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 ATP6V1C1P21283 382 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 PTPROQ16827 1216 aa15.46■□□□□ 0.07
PCF11-204ENST00000530660 ZNF658Q5TYW1 1059 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms