RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ADAMTS19Q8TE59 1207 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 WNT8BQ93098 351 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 EMID1Q96A84 441 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 NLRC5Q86WI3 1866 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 BDP1A6H8Y1 2624 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 IFIT3O14879 490 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 NBNO60934 754 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 F2P00734 622 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 KCNJ6P48051 423 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 WDR5P61964 334 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 TFF2Q03403 129 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 STOX1Q6ZVD7 989 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 FCHSD1Q86WN1 690 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 SUPT16HQ9Y5B9 1047 aaKnown RBP24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 MTCH2Q9Y6C9 303 aa24.08■■□□□ 1.45
TSPAN4-219ENST00000530404 LCHNA4D1U4 455 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 HAS3O00219 553 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 CYTH3O43739 400 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 BAIAP3O94812 1187 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 GGPS1O95749 300 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 DEFB103AP81534 67 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 SP2Q02086 613 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 HIC1Q14526 733 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 SKIV2LQ15477 1246 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 HSDL1Q3SXM5 330 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 MYSM1Q5VVJ2 828 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 PIBF1Q8WXW3 757 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 KATNAL1Q9BW62 490 aa24.07■■□□□ 1.44
TSPAN4-219ENST00000530404 KIF28PB7ZC32 967 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 TLL1O43897 1013 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 CHMLP26374 656 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 IRX6P78412 446 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 CELF3Q5SZQ8 465 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 VSIG10LQ86VR7 867 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 SPATA33Q96N06 139 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 RIOX1Q9H6W3 641 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 U3KPZ7 1027 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 BRWD1Q9NSI6 2320 aa24.06■■□□□ 1.44
TSPAN4-219ENST00000530404 E7EWF7 191 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 UBA1P22314 1058 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 RBL2Q08999 1139 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 WTAPQ15007 396 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 TRIM71Q2Q1W2 868 aaKnown RBP24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 ZNF618Q5T7W0 954 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 CNKSR3Q6P9H4 555 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 IL27Q8NEV9 243 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 UHRF1Q96T88 793 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 TSPYL2Q9H2G4 693 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 BCAS3Q9H6U6 928 aa24.05■■□□□ 1.44
TSPAN4-219ENST00000530404 LOXHD1Q8IVV2 1947 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 ERICH2A1L162 156 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 GCOM1H8Y6P7 765 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 GTPBP6O43824 516 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 POLR2MP0CAP2 368 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 CCND2P30279 289 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 PTK7Q13308 1070 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 TRAF7Q6Q0C0 670 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 RALYLQ86SE5 291 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 RUFY2Q8WXA3 655 aa24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 NECAB3Q96P71 396 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 MAP3K20Q9NYL2 800 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-219ENST00000530404 CXCL10P02778 98 aa24.03■■□□□ 1.44
TSPAN4-219ENST00000530404 HOXD8P13378 290 aaPredicted RBP24.03■■□□□ 1.44
TSPAN4-219ENST00000530404 ANTXR2P58335 489 aa24.03■■□□□ 1.44
TSPAN4-219ENST00000530404 NCOA7Q8NI08 942 aa24.03■■□□□ 1.44
TSPAN4-219ENST00000530404 ZBED2Q9BTP6 218 aa24.03■■□□□ 1.44
TSPAN4-219ENST00000530404 KCNQ1P51787 676 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 TROAPQ12815 778 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 GRB10Q13322 594 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 MBTPS1Q14703 1052 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 FAM117BQ6P1L5 589 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 KCNV1Q6PIU1 500 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 SAMD3Q8N6K7 520 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 MLXIPQ9HAP2 919 aa24.02■■□□□ 1.44
TSPAN4-219ENST00000530404 PNMA6FA0A0J9YX94 578 aa24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 PPFIA4O75335 1185 aa24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 POU3F3P20264 500 aaPredicted RBP24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 GDPD5Q8WTR4 605 aa24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 C16orf70Q9BSU1 422 aa24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 MYL10Q9BUA6 226 aa24.01■■□□□ 1.43
TSPAN4-219ENST00000530404 ATG2AQ2TAZ0 1938 aa24■■□□□ 1.43
TSPAN4-219ENST00000530404 SGSM2O43147 1006 aa24■■□□□ 1.43
TSPAN4-219ENST00000530404 LPXNO60711 386 aa24■■□□□ 1.43
TSPAN4-219ENST00000530404 PARNO95453 639 aaKnown RBP24■■□□□ 1.43
TSPAN4-219ENST00000530404 MRPS9P82933 396 aaKnown RBP24■■□□□ 1.43
TSPAN4-219ENST00000530404 SART3Q15020 963 aaKnown RBP24■■□□□ 1.43
TSPAN4-219ENST00000530404 RTEL1Q9NZ71 1219 aa24■■□□□ 1.43
TSPAN4-219ENST00000530404 MTUS1Q9ULD2 1270 aa24■■□□□ 1.43
TSPAN4-219ENST00000530404 BMP1P13497 986 aa23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 THPOP40225 353 aa23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 CATIPQ7Z7H3 387 aa23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 MB21D2Q8IYB1 491 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 IGDCC4Q8TDY8 1250 aa23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 TELO2Q9Y4R8 837 aa23.99■■□□□ 1.43
TSPAN4-219ENST00000530404 ABHD14A-ACY1A0A1B0GW23 586 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 LGALS2P05162 132 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 TGFB3P10600 412 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 TRAF1Q13077 416 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 SEMA3FQ13275 785 aa23.98■■□□□ 1.43
TSPAN4-219ENST00000530404 IKBKEQ14164 716 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms