RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 MLXIPQ9HAP2 919 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 SLC27A2O14975 620 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 HMGB1P09429 215 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 PGM5Q15124 567 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 PTGISQ16647 500 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 CELF3Q5SZQ8 465 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 NLRX1Q86UT6 975 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 SESTD1Q86VW0 696 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 FANCBQ8NB91 859 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 PPTC7Q8NI37 304 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 CAGE1Q8TC20 777 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 PHOSPHO2Q8TCD6 241 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 TIFAQ96CG3 184 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 FTOQ9C0B1 505 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 LSG1Q9H089 658 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 ZNF576Q9H609 170 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 SLC28A3Q9HAS3 691 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 COL20A1Q9P218 1284 aa9.03□□□□□ -0.96
CCDC90B-212ENST00000529312 DLL1O00548 723 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 MAFGO15525 162 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 CYTH3O43739 400 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 ARIH2O95376 493 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 MMP3P08254 477 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 IQCF3P0C7M6 154 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 GNAT1P11488 350 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 CYP2C9P11712 490 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 DNAJB2P25686 324 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 HOXA13P31271 388 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 ICAM3P32942 547 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 ANTXR2P58335 489 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 ARHGAP1Q07960 439 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 OTOP2Q7RTS6 562 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 TNPO1Q92973 898 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 CDHR1Q96JP9 859 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 SPATA33Q96N06 139 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 GUCD1Q96NT3 240 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 NEK1Q96PY6 1258 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 GAS2L1Q99501 681 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 GLT8D2Q9H1C3 349 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 PSTPIP2Q9H939 334 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 LY9Q9HBG7 655 aa9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 TRMT13Q9NUP7 481 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 RBM28Q9NW13 759 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-212ENST00000529312 CCDC196A0A1B0GTZ2 297 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SPATA31C2B4DYI2 1134 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PIK3CDO00329 1044 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SH2B2O14492 632 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 OPLAHO14841 1288 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 EFCAB14O75071 495 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 CDC45O75419 566 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 GGPS1O95749 300 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 FOSL2P15408 326 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PTGS1P23219 599 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PSEN2P49810 448 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 FGD1P98174 961 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 MYO9BQ13459 2157 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 KIAA0753Q2KHM9 967 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PIBF1Q8WXW3 757 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 CCDC136Q96JN2 1154 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SENP7Q9BQF6 1050 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 ALG1Q9BT22 464 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 TTYH1Q9H313 450 aaPredicted RBP9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
CCDC90B-212ENST00000529312 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 FIBPO43427 364 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 BAIAP3O94812 1187 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
CCDC90B-212ENST00000529312 SELPP16109 830 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 ATP2A2P16615 1042 aaKnown RBP9□□□□□ -0.97
CCDC90B-212ENST00000529312 PTK7Q13308 1070 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 MFSD10Q14728 455 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 PCNX4Q63HM2 1172 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 DEFB128Q7Z7B8 93 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 SRBD1Q8N5C6 995 aaKnown RBP9□□□□□ -0.97
CCDC90B-212ENST00000529312 MAFAQ8NHW3 353 aaPredicted RBP9□□□□□ -0.97
CCDC90B-212ENST00000529312 MYLIPQ8WY64 445 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 KAT2BQ92831 832 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 SCLYQ96I15 445 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 PBX4Q9BYU1 374 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 GTF2IRD1Q9UHL9 959 aa9□□□□□ -0.97
CCDC90B-212ENST00000529312 BAZ2BQ9UIF8 2168 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms