RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-217ENST00000529133 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 AGO4Q9HCK5 861 aaKnown RBP12.99□□□□□ -0.33
CAPN1-217ENST00000529133 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 KCNH7Q9NS40 1196 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 MYH7BA7E2Y1 1941 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 ARIH2O95376 493 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 DNM1Q05193 864 aaKnown RBP12.98□□□□□ -0.33
CAPN1-217ENST00000529133 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
CAPN1-217ENST00000529133 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-217ENST00000529133 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 KCNMB3Q9NPA1 279 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
CAPN1-217ENST00000529133 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 MSH4O15457 936 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 MAFGO15525 162 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 KCNA2P16389 499 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 ITGB3BPQ13352 177 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 PTPAQ15257 358 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 TMEM63BQ5T3F8 832 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 ATL3Q6DD88 541 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 CCDC62Q6P9F0 684 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 HAS1Q92839 578 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 UIMC1Q96RL1 719 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
CAPN1-217ENST00000529133 TFIP11Q9UBB9 837 aaKnown RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
CAPN1-217ENST00000529133 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 TBX3O15119 743 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 ADCY6O43306 1168 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 ATP9AO75110 1047 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 BMP15O95972 392 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 TGFB3P10600 412 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 SMPD1P17405 629 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 CCND3P30281 292 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 ATP2C1P98194 919 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 SP2Q02086 613 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 CEBPZQ03701 1054 aaKnown RBP12.96□□□□□ -0.33
CAPN1-217ENST00000529133 PTGDRQ13258 359 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 CALCRLQ16602 461 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 LY6KQ17RY6 165 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 SLC9C1Q4G0N8 1177 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 GJA10Q969M2 543 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
CAPN1-217ENST00000529133 NFASCO94856 1347 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 LAD1O00515 517 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 SEPT4O43236 478 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 YEATS4O95619 227 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 AKR1A1P14550 325 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 PTGS1P23219 599 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 KRT85P78386 507 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 STK38Q15208 465 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-217ENST00000529133 COPS5Q92905 334 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-217ENST00000529133 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 RIT2Q99578 217 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 SENP7Q9BQF6 1050 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
CAPN1-217ENST00000529133 MCM3APO60318 1980 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 MARCH6O60337 910 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 SORBS3O60504 671 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 GAS7O60861 476 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 PSMD10O75832 226 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 GGPS1O95749 300 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 NCLP19338 710 aaKnown RBP12.94□□□□□ -0.34
CAPN1-217ENST00000529133 CNGA1P29973 690 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 PRPHP41219 470 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 ARHGAP1Q07960 439 aa12.94□□□□□ -0.34
CAPN1-217ENST00000529133 NEDD9Q14511 834 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms