RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 COL4A3BPQ9Y5P4 624 aa16.89■□□□□ 0.29
TRIM29-210ENST00000528870 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 TRAF5O00463 557 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 PPP1R11O60927 126 aaPredicted RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 SYF2O95926 243 aaKnown RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 FKBP3Q00688 224 aaKnown RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 SLC20A2Q08357 652 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 FOXR2Q6PJQ5 311 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 MMGT1Q8N4V1 131 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 CCDC155Q8N6L0 562 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 GJA10Q969M2 543 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 OSBPL9Q96SU4 736 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 SELENOOQ9BVL4 669 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 EDEM3Q9BZQ6 932 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 PANK4Q9NVE7 773 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 LY75O60449 1722 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 MYBL2P10244 700 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 TCP1P17987 556 aaKnown RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 ADRA2BP18089 450 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 GFPT1Q06210 699 aaPredicted RBP16.88■□□□□ 0.29
TRIM29-210ENST00000528870 FAM26FQ5R3K3 315 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 HYOU1Q9Y4L1 999 aa16.88■□□□□ 0.29
TRIM29-210ENST00000528870 GCFC2P16383 781 aaKnown RBP16.87■□□□□ 0.29
TRIM29-210ENST00000528870 SLC16A2P36021 539 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 ITIH3Q06033 890 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
TRIM29-210ENST00000528870 CCDC181Q5TID7 509 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 NFRKBQ6P4R8 1299 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 ZNF572Q7Z3I7 529 aaPredicted RBP16.87■□□□□ 0.29
TRIM29-210ENST00000528870 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 DDX4Q9NQI0 724 aaKnown RBP16.87■□□□□ 0.29
TRIM29-210ENST00000528870 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 KDM3AQ9Y4C1 1321 aa16.87■□□□□ 0.29
TRIM29-210ENST00000528870 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 ZBTB5O15062 677 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 PJA2O43164 708 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 IVLP07476 585 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 KCNMA1Q12791 1236 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 ZCWPW2Q504Y3 356 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 AFAP1L1Q8TED9 768 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 PSMB7Q99436 277 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 NLRC4Q9NPP4 1024 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 SSU72P8A0A1W2PR75 194 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 RIMBP2O15034 1052 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 GYS1P13807 737 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 CXCR5P32302 372 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 SLC1A4P43007 532 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 RASSF7Q02833 373 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 SLC9C1Q4G0N8 1177 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 ARHGAP27Q6ZUM4 889 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 NOX5Q96PH1 765 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
TRIM29-210ENST00000528870 CEP72Q9P209 647 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
TRIM29-210ENST00000528870 GGCXP38435 758 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 SFMBT2Q5VUG0 894 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 RUBCNQ92622 972 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 HINFPQ9BQA5 517 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 USP40Q9NVE5 1235 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 USP21Q9UK80 565 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 E9PMD0 336 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 NCK2O43639 380 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 PRPF6O94906 941 aaKnown RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 PAFAH1B1P43034 410 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 HGSNATQ68CP4 663 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 NELFCDQ8IXH7 590 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 AENQ8WTP8 325 aaKnown RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 CEP63Q96MT8 703 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 SALL4Q9UJQ4 1053 aa16.85■□□□□ 0.29
TRIM29-210ENST00000528870 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
TRIM29-210ENST00000528870 RPS6KA5O75582 802 aa16.84■□□□□ 0.29
TRIM29-210ENST00000528870 GNA14O95837 355 aa16.84■□□□□ 0.29
TRIM29-210ENST00000528870 SERPING1P05155 500 aa16.84■□□□□ 0.29
TRIM29-210ENST00000528870 SHMT1P34896 483 aa16.84■□□□□ 0.29
TRIM29-210ENST00000528870 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms