RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 MXD3Q9BW11 206 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 VIPAS39Q9H9C1 493 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 EHD2Q9NZN4 543 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 FOCADQ5VW36 1801 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L10C9JJH3 530 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 TRAF5O00463 557 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 NCK2O43639 380 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 PDXDC1Q6P996 788 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 HDAC7Q8WUI4 952 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 KANSL2Q9H9L4 492 aa20.88■□□□□ 0.93
TM9SF1-206ENST00000528669 ABCB11O95342 1321 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 MPHOSPH10O00566 681 aaKnown RBP20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 LCA5LO95447 670 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 GYS1P13807 737 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 CUL5Q93034 780 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 SELENOOQ9BVL4 669 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 PANK4Q9NVE7 773 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 LY75O60449 1722 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 E9PMD0 336 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 CLK2P49760 499 aaKnown RBP20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 RASSF7Q02833 373 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 PSMD2Q13200 908 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 CCDC40Q4G0X9 1142 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 LEKR1Q6ZMV7 388 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 NELFCDQ8IXH7 590 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 OSBPL9Q96SU4 736 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 PCDHA12Q9UN75 941 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
TM9SF1-206ENST00000528669 NPHP3-ACAD11A0A0J9YXS1 232 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 BUB1O43683 1085 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 RAD21O60216 631 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 BBOX1O75936 387 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 AARSP49588 968 aaKnown RBP eCLIP20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 TDRD12Q587J7 1177 aaKnown RBP20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 TMC4Q7Z404 712 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 LRRC1Q9BTT6 524 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 LRRC27Q9C0I9 530 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 SERPINB13Q9UIV8 391 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 COL4A3BPQ9Y5P4 624 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 SLC1A4P43007 532 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 SCNN1DP51172 638 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 APBA1Q02410 837 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 FAM26FQ5R3K3 315 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 ALS2CR12Q96Q35 445 aa20.86■□□□□ 0.93
TM9SF1-206ENST00000528669 A0A0U1RQG5 324 aaPredicted RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 GGCXP38435 758 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 FKBP3Q00688 224 aaKnown RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 SLC7A5Q01650 507 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 ZCWPW2Q504Y3 356 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 HGSNATQ68CP4 663 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 CERS5Q8N5B7 392 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 SPATA4Q8NEY3 305 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 ZFP91Q96JP5 570 aaPredicted RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 CRACR2AQ9BSW2 395 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 DMGDHQ9UI17 866 aaKnown RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP21Q9UK80 565 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 KIAA1024Q9UPX6 916 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L15C9J2P7 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L13C9JLJ4 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L11C9JVI0 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L18D6R9N7 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L22D6RA61 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L17D6RBQ6 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L19D6RCP7 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L20D6RJB6 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 TULP2O00295 520 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 SHMT1P34896 483 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L24Q0WX57 530 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 ASTE1Q2TB18 679 aaPredicted RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP17L6PQ6QN14 398 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 USP40Q9NVE5 1235 aa20.85■□□□□ 0.93
TM9SF1-206ENST00000528669 PRPF6O94906 941 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 MRPL12P52815 198 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 NAP1L1P55209 391 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 PPP1R18Q6NYC8 613 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 FOXR1Q6PIV2 292 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 MMGT1Q8N4V1 131 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 LSM14BQ9BX40 385 aaKnown RBP20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 HYOU1Q9Y4L1 999 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 POTEB3A0JP26 581 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 POTECB2RU33 542 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 ZBTB5O15062 677 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 CCDC70Q6NSX1 233 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 POTEBQ6S5H4 581 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 PROM2Q8N271 834 aa20.84■□□□□ 0.93
TM9SF1-206ENST00000528669 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
TM9SF1-206ENST00000528669 NOL4O94818 638 aa20.83■□□□□ 0.93
TM9SF1-206ENST00000528669 CCDC181Q5TID7 509 aa20.83■□□□□ 0.93
TM9SF1-206ENST00000528669 CWC15Q9P013 229 aaKnown RBP20.83■□□□□ 0.93
TM9SF1-206ENST00000528669 LCMT1Q9UIC8 334 aa20.83■□□□□ 0.93
TM9SF1-206ENST00000528669 AGPSO00116 658 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms