RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CEP104O60308 925 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 COPB2P35606 906 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 SLC16A2P36021 539 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 HDLBPQ00341 1268 aaKnown RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 ACTN3Q08043 901 aaPredicted RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 FAM114A1Q8IWE2 563 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 CCDC170Q8IYT3 715 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 DDX12PQ92771 950 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 SEC63Q9UGP8 760 aaKnown RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 MYH3P11055 1940 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 OPA1O60313 960 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 HNRNPH1P31943 449 aaKnown RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 TUBB4BP68371 445 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 CALCRLQ16602 461 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 KLHDC7AQ5VTJ3 777 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 KSR1Q8IVT5 923 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 UBLCP1Q8WVY7 318 aaPredicted RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 DPH5Q9H2P9 285 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 CD248Q9HCU0 757 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.88□□□□□ -0.67
SF3B2-206ENST00000528302 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
SF3B2-206ENST00000528302 TARSL2A2RTX5 802 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 ZNF233A6NK53 670 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 SLC30A10Q6XR72 485 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 PYM1Q9BRP8 204 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 MMTAG2Q9BU76 263 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 DDX47Q9H0S4 455 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 PLAGL2Q9UPG8 496 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 EPHB4P54760 987 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 RPS8P62241 208 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 DCAF17Q5H9S7 520 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 SEPT11Q9NVA2 429 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 A0A087X0T9 212 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 MEIS1O00470 390 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 RAD51CO43502 376 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 FAM228BP0C875 321 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 TAL1P17542 331 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 KCNB1Q14721 858 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 NBPF9Q3BBW0 867 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 CEP57Q86XR8 500 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 LARP4BQ92615 738 aaKnown RBP10.87□□□□□ -0.67
SF3B2-206ENST00000528302 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 PLAAQ9Y263 795 aa10.87□□□□□ -0.67
SF3B2-206ENST00000528302 FLT1P17948 1338 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 CHD4Q14839 1912 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 TLDC2A0PJX2 215 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 FRMD3A2A2Y4 597 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 E9PMD0 336 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 RPS6KA5O75582 802 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
SF3B2-206ENST00000528302 NR1D1P20393 614 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 SNAP25P60880 206 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 ECM1Q16610 540 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
SF3B2-206ENST00000528302 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-206ENST00000528302 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 EYA3Q99504 573 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 TSGA10Q9BZW7 698 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 ZNF652Q9Y2D9 606 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 ANO9A1A5B4 782 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 LDHBP07195 334 aaKnown RBP10.86□□□□□ -0.67
SF3B2-206ENST00000528302 RCAN1P53805 252 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 AMPD3Q01432 767 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 KLHL30Q0D2K2 578 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 GRB10Q13322 594 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 FAM83BQ5T0W9 1011 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 SFMBT2Q5VUG0 894 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 MMS22LQ6ZRQ5 1243 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 KIRREL3Q8IZU9 778 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 CELF4Q9BZC1 486 aaKnown RBP10.86□□□□□ -0.67
SF3B2-206ENST00000528302 CCSER1Q9C0I3 900 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 IKZF4Q9H2S9 585 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 SIK3Q9Y2K2 1263 aa10.86□□□□□ -0.67
SF3B2-206ENST00000528302 GOLGA8KD6RF30 607 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 LSP1P33241 339 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 STAT3P40763 770 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 PARP10Q53GL7 1025 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 HERC4Q5GLZ8 1057 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-206ENST00000528302 GJB7Q6PEY0 223 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 IFT20Q8IY31 132 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 C6orf50Q9HD87 102 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ARPP21Q9UBL0 812 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms