RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 CCDC155Q8N6L0 562 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 KATNAL1Q9BW62 490 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 SLC28A3Q9HAS3 691 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 GTF2IRD1Q9UHL9 959 aa17.52■□□□□ 0.4
EXOSC4-203ENST00000527954 HAS3O00219 553 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 PPFIA4O75335 1185 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 F2P00734 622 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 ATP2A2P16615 1042 aaKnown RBP17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 LIFRP42702 1097 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 MRPS9P82933 396 aaKnown RBP17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 DHX38Q92620 1227 aaKnown RBP17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 GAS2L1Q99501 681 aaPredicted RBP17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
EXOSC4-203ENST00000527954 CALM1P0DP23 149 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 CALM2P0DP24 149 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 CALM3P0DP25 149 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 CCDC82Q8N4S0 544 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 CUL5Q93034 780 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
EXOSC4-203ENST00000527954 FRMPD4Q14CM0 1322 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 UNC80Q8N2C7 3258 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 hCG_1642624A0A1W2PR95 340 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 MEIS2O14770 477 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 SELPP16109 830 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 USP38Q8NB14 1042 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 PPM1EQ8WY54 764 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 INPP4AQ96PE3 977 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 COL25A1Q9BXS0 654 aaPredicted RBP17.49■□□□□ 0.39
EXOSC4-203ENST00000527954 SCN5AQ14524 2016 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 CDH23Q9H251 3354 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 STAM2O75886 525 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 CKBP12277 381 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 ICAM3P32942 547 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 PTK7Q13308 1070 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 ADGRE1Q14246 886 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 HIC1Q14526 733 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 GPNMBQ14956 572 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 PPP2R2DQ66LE6 453 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
EXOSC4-203ENST00000527954 EYSQ5T1H1 3165 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 RBAK-RBAKDNI3L0D1 243 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 PIK3CDO00329 1044 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 FIBPO43427 364 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 IGFBP4P22692 258 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 RBL2Q08999 1139 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 NEDD9Q14511 834 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 PCNX4Q63HM2 1172 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 CYFIP1Q7L576 1253 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 SGMS1Q86VZ5 419 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 WNT8BQ93098 351 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
EXOSC4-203ENST00000527954 H3BRB1 525 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 NOP56O00567 594 aaKnown RBP17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 LGALS2P05162 132 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 TRIM71Q2Q1W2 868 aaKnown RBP17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 PHOSPHO2Q8TCD6 241 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 TUT1Q9H6E5 874 aaKnown RBP17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
EXOSC4-203ENST00000527954 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.38
EXOSC4-203ENST00000527954 MYH7BA7E2Y1 1941 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 NBNO60934 754 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 CDC45O75419 566 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 CA3P07451 260 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 EXOSC10Q01780 885 aaKnown RBP17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 SP4Q02446 784 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 CCDC85BQ15834 202 aaPredicted RBP17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 UBE2SQ16763 222 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 TCTN1Q2MV58 587 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 ADCK5Q3MIX3 580 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 ZNF618Q5T7W0 954 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
EXOSC4-203ENST00000527954 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms