RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 CKBP12277 381 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 SELPP16109 830 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 UBA1P22314 1058 aaKnown RBP21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 ZNF200P98182 395 aaPredicted RBP21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 RBL2Q08999 1139 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 TRAF1Q13077 416 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 TCTN1Q2MV58 587 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 LRRC8DQ7L1W4 858 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 CATIPQ7Z7H3 387 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 CCDC155Q8N6L0 562 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 WNT8BQ93098 351 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 SPATA33Q96N06 139 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 MYL10Q9BUA6 226 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 KATNAL1Q9BW62 490 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 TANC1Q9C0D5 1861 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 RFXAPO00287 272 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 NBNO60934 754 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 CCND2P30279 289 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 TRIM71Q2Q1W2 868 aaKnown RBP21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 TJAP1Q5JTD0 557 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 HERC6Q8IVU3 1022 aa21.75■■□□□ 1.07
PTP4A3-206ENST00000524028 EPOPA6NHQ4 379 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 BAIAP3O94812 1187 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 TGFB3P10600 412 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 MRPS9P82933 396 aaKnown RBP21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 PTK7Q13308 1070 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 SYMPKQ92797 1274 aaKnown RBP21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 C16orf70Q9BSU1 422 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 CERS4Q9HA82 394 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 TTC28Q96AY4 2481 aa21.74■■□□□ 1.07
PTP4A3-206ENST00000524028 TET1Q8NFU7 2136 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 CXCL10P02778 98 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 TAP1Q03518 808 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 TMCO2Q7Z6W1 182 aaPredicted RBP21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 ZNF654Q8IZM8 581 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 MAP3K14Q99558 947 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 LSG1Q9H089 658 aaKnown RBP21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 FRMPD4Q14CM0 1322 aa21.73■■□□□ 1.07
PTP4A3-206ENST00000524028 BAZ2BQ9UIF8 2168 aaKnown RBP21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 PRC1O43663 620 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 WDR5P61964 334 aaKnown RBP21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 SEMA3FQ13275 785 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 ZNF618Q5T7W0 954 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 SPRED2Q7Z698 418 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 ATXN2LQ8WWM7 1075 aaKnown RBP21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 SPZ1Q9BXG8 430 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 MLXIPQ9HAP2 919 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 THEGQ9P2T0 379 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 MYO9BQ13459 2157 aa21.72■■□□□ 1.07
PTP4A3-206ENST00000524028 DDAH1O94760 285 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 DEFB103AP81534 67 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 MBTPS1Q14703 1052 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 CNKSR3Q6P9H4 555 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 INPP4AQ96PE3 977 aaPredicted RBP21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 ASB2Q96Q27 587 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 RTEL1Q9NZ71 1219 aa21.71■■□□□ 1.07
PTP4A3-206ENST00000524028 SPATA31C2B4DYI2 1134 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 MEIS2O14770 477 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 PLEKHA8P1O95397 391 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 PARNO95453 639 aaKnown RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 ICAM3P32942 547 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 KCNJ6P48051 423 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 USP17L6PQ6QN14 398 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 MICALL1Q8N3F8 863 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 SRBD1Q8N5C6 995 aaKnown RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 CTCFLQ8NI51 663 aaPredicted RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 RRP36Q96EU6 259 aaKnown RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 TELO2Q9Y4R8 837 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 MTCH2Q9Y6C9 303 aa21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 TRIP12Q14669 1992 aaPredicted RBP21.7■■□□□ 1.06
PTP4A3-206ENST00000524028 LCHNA4D1U4 455 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 KIF28PB7ZC32 967 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 SLC27A2O14975 620 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 LGALS2P05162 132 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 POU3F3P20264 500 aaPredicted RBP21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 SMARCA1P28370 1054 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 KRT40Q6A162 431 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 CASC1Q6TDU7 716 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 SERINC5Q86VE9 423 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 CMTR1Q8N1G2 835 aaKnown RBP21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 ARNTL2Q8WYA1 636 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 ESYT1Q9BSJ8 1104 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 MTA3Q9BTC8 594 aa21.69■■□□□ 1.06
PTP4A3-206ENST00000524028 H3BRB1 525 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 TLL1O43897 1013 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 STAM2O75886 525 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 RXRAP19793 462 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 HOXC8P31273 242 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 KIF5BP33176 963 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 MCM5P33992 734 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 NECTIN1Q15223 517 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 GNPTABQ3T906 1256 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 CYFIP1Q7L576 1253 aa21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 TUT1Q9H6E5 874 aaKnown RBP21.68■■□□□ 1.06
PTP4A3-206ENST00000524028 MYH7BA7E2Y1 1941 aa21.67■■□□□ 1.06
PTP4A3-206ENST00000524028 C17orf102A2RUQ5 167 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms