RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 RGS20O76081 388 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 ACTN1P12814 892 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 ATP2A2P16615 1042 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 KIF5BP33176 963 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 SP2Q02086 613 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 PTPN11Q06124 597 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 MFSD10Q14728 455 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 KIAA0753Q2KHM9 967 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 CREB3L3Q68CJ9 461 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 CUL5Q93034 780 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 CDH23Q9H251 3354 aa11.83□□□□□ -0.52
CTNNA1-235ENST00000522730 MYH6P13533 1939 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 CELF3Q5SZQ8 465 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 MYSM1Q5VVJ2 828 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 KCNV1Q6PIU1 500 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 USP17L6PQ6QN14 398 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 MICALL1Q8N3F8 863 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 CCDC155Q8N6L0 562 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
CTNNA1-235ENST00000522730 NOP56O00567 594 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 PPFIA4O75335 1185 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 DDAH1O94760 285 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 PFKMP08237 780 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 RFC2P35250 354 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 GNAQP50148 359 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 SP4Q02446 784 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 GNPTABQ3T906 1256 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 PPP2R2DQ66LE6 453 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 SYNE3Q6ZMZ3 975 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 SRBD1Q8N5C6 995 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 COL25A1Q9BXS0 654 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 NAP1L2Q9ULW6 460 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-235ENST00000522730 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 TGFB3P10600 412 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 SELPP16109 830 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 UBA1P22314 1058 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 MRPS9P82933 396 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 GHRHRQ02643 423 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 UTP14CQ5TAP6 766 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 RNF20Q5VTR2 975 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 LRRC8DQ7L1W4 858 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 CENPQQ7L2Z9 268 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 TMCO2Q7Z6W1 182 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 USP38Q8NB14 1042 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 TCEANC2Q96MN5 208 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 SPZ1Q9BXG8 430 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 PSTPIP2Q9H939 334 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 CHD7Q9P2D1 2997 aa11.8□□□□□ -0.52
CTNNA1-235ENST00000522730 SPATA31C2B4DYI2 1134 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 RFXAPO00287 272 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CALM1P0DP23 149 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CALM2P0DP24 149 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CALM3P0DP25 149 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CKBP12277 381 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 THPOP40225 353 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 KCNJ6P48051 423 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 ADGRE1Q14246 886 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 HEATR3Q7Z4Q2 680 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 SESTD1Q86VW0 696 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 MICU3Q86XE3 530 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 FANCBQ8NB91 859 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 AFAP1L1Q8TED9 768 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 DHX38Q92620 1227 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 CTAGE1Q96RT6 745 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 MAP3K14Q99558 947 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 PKD2L1Q9P0L9 805 aa11.79□□□□□ -0.52
CTNNA1-235ENST00000522730 SCN10AQ9Y5Y9 1956 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 H3BRB1 525 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 HAS3O00219 553 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 MEIS2O14770 477 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 F2P00734 622 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms