RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 HTTP42858 3142 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 SETQ01105 290 aaPredicted RBP18.44■□□□□ 0.54
LSM1-204ENST00000522515 PTGDRQ13258 359 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 ORC2Q13416 577 aaPredicted RBP18.44■□□□□ 0.54
LSM1-204ENST00000522515 MFSD14CQ5VZR4 134 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 ATL3Q6DD88 541 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 CTU1Q7Z7A3 348 aaKnown RBP18.44■□□□□ 0.54
LSM1-204ENST00000522515 C4orf32Q8N8J7 132 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 KCNMB3Q9NPA1 279 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 POLR3EQ9NVU0 708 aa18.44■□□□□ 0.54
LSM1-204ENST00000522515 SPATA31C2B4DYI2 1134 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 MSH4O15457 936 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 FIBPO43427 364 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 HMGCRP04035 888 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 ZNF865P0CJ78 1059 aaPredicted RBP18.43■□□□□ 0.54
LSM1-204ENST00000522515 ICAM3P32942 547 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 NASPP49321 788 aaPredicted RBP18.43■□□□□ 0.54
LSM1-204ENST00000522515 PTPAQ15257 358 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 SLAIN1Q8ND83 568 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 ETNPPLQ8TBG4 499 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 GJA10Q969M2 543 aa18.43■□□□□ 0.54
LSM1-204ENST00000522515 ZHX1Q9UKY1 873 aaPredicted RBP18.43■□□□□ 0.54
LSM1-204ENST00000522515 MAFGO15525 162 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 ATP9AO75110 1047 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 ARIH2O95376 493 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 NCLP19338 710 aaKnown RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 GRK4P32298 578 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 KRT85P78386 507 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 SP2Q02086 613 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CACNB2Q08289 660 aaPredicted RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 CALCRLQ16602 461 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 TMEM63BQ5T3F8 832 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 TRPV1Q8NER1 839 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 HAS1Q92839 578 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CDHR1Q96JP9 859 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 AGO4Q9HCK5 861 aaKnown RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 CYBAP13498 195 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 ADCYAP1R1P41586 468 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 ATP2C1P98194 919 aaPredicted RBP18.42■□□□□ 0.54
LSM1-204ENST00000522515 CCDC144BQ3MJ40 725 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CCDC62Q6P9F0 684 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 LINC00301Q8NCQ3 95 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 SCFD2Q8WU76 684 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 ZNF577Q9BSK1 485 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CEP131Q9UPN4 1083 aa18.42■□□□□ 0.54
LSM1-204ENST00000522515 CENPFP49454 3210 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.41■□□□□ 0.54
LSM1-204ENST00000522515 TBX3O15119 743 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 BMP15O95972 392 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 TGFB3P10600 412 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
LSM1-204ENST00000522515 ITGB3BPQ13352 177 aaPredicted RBP18.41■□□□□ 0.54
LSM1-204ENST00000522515 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 SH3TC2Q8TF17 1288 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 SLC5A5Q92911 643 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 BCAS3Q9H6U6 928 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 DDX41Q9UJV9 622 aaKnown RBP18.41■□□□□ 0.54
LSM1-204ENST00000522515 TCHHQ07283 1943 aa18.41■□□□□ 0.54
LSM1-204ENST00000522515 MARCH6O60337 910 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 YEATS4O95619 227 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 INHAP05111 366 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 TXNP10599 105 aaKnown RBP18.4■□□□□ 0.54
LSM1-204ENST00000522515 KCNA2P16389 499 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 TXKP42681 527 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 TTLL4Q14679 1199 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 STK38Q15208 465 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 KCNV1Q6PIU1 500 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 FAM20AQ96MK3 541 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 RCOR1Q9UKL0 485 aa18.4■□□□□ 0.54
LSM1-204ENST00000522515 LAD1O00515 517 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 DHX15O43143 795 aaKnown RBP18.39■□□□□ 0.53
LSM1-204ENST00000522515 ADCY6O43306 1168 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 BAG4O95429 457 aaKnown RBP18.39■□□□□ 0.53
LSM1-204ENST00000522515 UBA1P22314 1058 aaKnown RBP18.39■□□□□ 0.53
LSM1-204ENST00000522515 PTGS1P23219 599 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 MARCKSP29966 332 aaPredicted RBP18.39■□□□□ 0.53
LSM1-204ENST00000522515 IQSEC1Q6DN90 963 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
LSM1-204ENST00000522515 SENP7Q9BQF6 1050 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
LSM1-204ENST00000522515 SPTLC2O15270 562 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 SORBS3O60504 671 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 PSMD10O75832 226 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 SMPD1P17405 629 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 CCND3P30281 292 aaPredicted RBP18.38■□□□□ 0.53
LSM1-204ENST00000522515 PRPHP41219 470 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 IL17AQ16552 155 aa18.38■□□□□ 0.53
LSM1-204ENST00000522515 GJC2Q5T442 439 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms