RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 ACTN1P12814 892 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 HOXD8P13378 290 aaPredicted RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 FOSL2P15408 326 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 PSEN2P49810 448 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 KRT32Q14532 448 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 MFSD10Q14728 455 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 PTGISQ16647 500 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 MYSM1Q5VVJ2 828 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 SRBD1Q8N5C6 995 aaKnown RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 MYLIPQ8WY64 445 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 KAT2BQ92831 832 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 SPATA33Q96N06 139 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
PVT1-209ENST00000520913 GTF2IRD1Q9UHL9 959 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
PVT1-209ENST00000520913 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 HAS3O00219 553 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 FIBPO43427 364 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 MRPS9P82933 396 aaKnown RBP12.37□□□□□ -0.43
PVT1-209ENST00000520913 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 HSDL1Q3SXM5 330 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 XRRA1Q6P2D8 792 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 DEFB128Q7Z7B8 93 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 CMTR1Q8N1G2 835 aaKnown RBP12.37□□□□□ -0.43
PVT1-209ENST00000520913 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 MLXIPQ9HAP2 919 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
PVT1-209ENST00000520913 MSRAQ9UJ68 235 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 SLC4A7Q9Y6M7 1214 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 NLRC5Q86WI3 1866 aa12.37□□□□□ -0.43
PVT1-209ENST00000520913 MYO9BQ13459 2157 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 GRXCR1A8MXD5 290 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
PVT1-209ENST00000520913 MEIS2O14770 477 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 SORBS3O60504 671 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 ICAM3P32942 547 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 PBX2P40425 430 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 RBL2Q08999 1139 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 NEDD9Q14511 834 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 PCNX4Q63HM2 1172 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 MAFAQ8NHW3 353 aaPredicted RBP12.36□□□□□ -0.43
PVT1-209ENST00000520913 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
PVT1-209ENST00000520913 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
PVT1-209ENST00000520913 HDAC6Q9UBN7 1215 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 LOXHD1Q8IVV2 1947 aa12.36□□□□□ -0.43
PVT1-209ENST00000520913 ZBTB43O43298 467 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
PVT1-209ENST00000520913 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
PVT1-209ENST00000520913 SP2Q02086 613 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 PTK7Q13308 1070 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 RTN1Q16799 776 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 METTL7BQ6UX53 244 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 LRRC8DQ7L1W4 858 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
PVT1-209ENST00000520913 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 CCDC82Q8N4S0 544 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 DHX38Q92620 1227 aaKnown RBP12.35□□□□□ -0.43
PVT1-209ENST00000520913 CTAGE1Q96RT6 745 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
PVT1-209ENST00000520913 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 RALGAPA2Q2PPJ7 1873 aa12.35□□□□□ -0.43
PVT1-209ENST00000520913 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
PVT1-209ENST00000520913 VCANP13611 3396 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 hCG_1642624A0A1W2PR95 340 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 GOLGA8AA7E2F4 631 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SPATA31C2B4DYI2 1134 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 LGALS2P05162 132 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 SELPP16109 830 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 ATP2A2P16615 1042 aaKnown RBP12.34□□□□□ -0.43
PVT1-209ENST00000520913 RCAN1P53805 252 aa12.34□□□□□ -0.43
PVT1-209ENST00000520913 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
PVT1-209ENST00000520913 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms