RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CLIC4Q9Y696 253 aa20.18■□□□□ 0.82
SDC2-205ENST00000520233 RBM47A0AV96 593 aaKnown RBP20.17■□□□□ 0.82
SDC2-205ENST00000520233 TBX3O15119 743 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 HMGCRP04035 888 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 TGFB3P10600 412 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 ELNP15502 786 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 NASPP49321 788 aaPredicted RBP20.17■□□□□ 0.82
SDC2-205ENST00000520233 TAPT1Q6NXT6 567 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 KCNV1Q6PIU1 500 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 C4orf32Q8N8J7 132 aa20.17■□□□□ 0.82
SDC2-205ENST00000520233 FTOQ9C0B1 505 aaKnown RBP eCLIP20.17■□□□□ 0.824e-39■■□□□ 12.5
SDC2-205ENST00000520233 LAD1O00515 517 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 MSH4O15457 936 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 ZNF865P0CJ78 1059 aaPredicted RBP20.16■□□□□ 0.82
SDC2-205ENST00000520233 GRK4P32298 578 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 KRT85P78386 507 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
SDC2-205ENST00000520233 PTGDRQ13258 359 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 SEMA3FQ13275 785 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 PTPAQ15257 358 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 CALCRLQ16602 461 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 SCFD2Q8WU76 684 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 TMEM60Q9H2L4 133 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 AGO4Q9HCK5 861 aaKnown RBP20.16■□□□□ 0.82
SDC2-205ENST00000520233 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
SDC2-205ENST00000520233 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
SDC2-205ENST00000520233 MYH15Q9Y2K3 1946 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 BAG4O95429 457 aaKnown RBP20.15■□□□□ 0.82
SDC2-205ENST00000520233 YEATS4O95619 227 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 CYBAP13498 195 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 ATP2C1P98194 919 aaPredicted RBP20.15■□□□□ 0.82
SDC2-205ENST00000520233 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
SDC2-205ENST00000520233 TTLL4Q14679 1199 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 SLC39A14Q15043 492 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 PKN2Q16513 984 aaKnown RBP20.15■□□□□ 0.82
SDC2-205ENST00000520233 PRAMEF19Q5SWL8 479 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 IQSEC1Q6DN90 963 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 SLFN12Q8IYM2 578 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 ETNPPLQ8TBG4 499 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 CHAMP1Q96JM3 812 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 FAM20AQ96MK3 541 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 MTMR9Q96QG7 549 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 ZNF577Q9BSK1 485 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 PDGFCQ9NRA1 345 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 MRVI1Q9Y6F6 885 aa20.15■□□□□ 0.82
SDC2-205ENST00000520233 MORC2Q9Y6X9 1032 aaPredicted RBP20.15■□□□□ 0.82
SDC2-205ENST00000520233 OR52Z1P0C646 297 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 NCLP19338 710 aaKnown RBP20.14■□□□□ 0.81
SDC2-205ENST00000520233 PRPHP41219 470 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 TRIM32Q13049 653 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 MAP3K21Q5TCX8 1036 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 HAS1Q92839 578 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 SLC5A5Q92911 643 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 SENP7Q9BQF6 1050 aa20.14■□□□□ 0.81
SDC2-205ENST00000520233 DDX41Q9UJV9 622 aaKnown RBP20.14■□□□□ 0.81
SDC2-205ENST00000520233 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
SDC2-205ENST00000520233 MARCH6O60337 910 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 ATP9AO75110 1047 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
SDC2-205ENST00000520233 ADCYAP1R1P41586 468 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 STK38Q15208 465 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 CCDC144BQ3MJ40 725 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 ARL6IP4Q66PJ3 421 aaKnown RBP20.13■□□□□ 0.81
SDC2-205ENST00000520233 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
SDC2-205ENST00000520233 GIMAP8Q8ND71 665 aaPredicted RBP20.13■□□□□ 0.81
SDC2-205ENST00000520233 TRPV1Q8NER1 839 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 RIT2Q99578 217 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 TBC1D22BQ9NU19 505 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 RCOR1Q9UKL0 485 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 FAM184BQ9ULE4 1060 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 MCM3APO60318 1980 aa20.13■□□□□ 0.81
SDC2-205ENST00000520233 KIAA1217Q5T5P2 1943 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 NFASCO94856 1347 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 ARIH2O95376 493 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 INHAP05111 366 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 PRKAR2AP13861 404 aaKnown RBP20.12■□□□□ 0.81
SDC2-205ENST00000520233 KCNA2P16389 499 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 SP2Q02086 613 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 NEDD9Q14511 834 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 CLEC17AQ6ZS10 378 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 SCAND2PQ9GZW5 306 aaPredicted RBP20.12■□□□□ 0.81
SDC2-205ENST00000520233 PKD2L1Q9P0L9 805 aa20.12■□□□□ 0.81
SDC2-205ENST00000520233 NKRFO15226 690 aaKnown RBP eCLIP20.11■□□□□ 0.811e-7■□□□□ 10.9
SDC2-205ENST00000520233 SPTLC2O15270 562 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 DHX15O43143 795 aaKnown RBP20.11■□□□□ 0.81
SDC2-205ENST00000520233 PPP6R2O75170 966 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 PSMD10O75832 226 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 AKR1A1P14550 325 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 UBA1P22314 1058 aaKnown RBP20.11■□□□□ 0.81
SDC2-205ENST00000520233 ITGB3BPQ13352 177 aaPredicted RBP20.11■□□□□ 0.81
SDC2-205ENST00000520233 LY6KQ17RY6 165 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 DUSP28Q4G0W2 176 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 KCNG4Q8TDN1 519 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 GJA10Q969M2 543 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 SPATA32Q96LK8 384 aa20.11■□□□□ 0.81
SDC2-205ENST00000520233 SDF4Q9BRK5 362 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms