RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 MMP3P08254 477 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 ACTN1P12814 892 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 CASTP20810 708 aaKnown RBP12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 CHMLP26374 656 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 HSD17B4P51659 736 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 BFSP2Q13515 415 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 CYB5R4Q7L1T6 521 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 AFG1LQ8WV93 481 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 VWCEQ96DN2 955 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 NCOR1O75376 2440 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 ZBBXA8MT70 800 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 OPLAHO14841 1288 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 IFIT3O14879 490 aaKnown RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 CYP21A2P08686 494 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 SART3Q15020 963 aaKnown RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 DGKDQ16760 1214 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 STOX1Q6ZVD7 989 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 CHST3Q7LGC8 479 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 DEFB128Q7Z7B8 93 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 NKX2-4Q9H2Z4 354 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 DDX41Q9UJV9 622 aaKnown RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 PCDHGA10Q9Y5H3 936 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 PCDHA1Q9Y5I3 950 aa12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
IGHV1-17-201ENST00000520119 GBF1Q92538 1859 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 TRIP12Q14669 1992 aaPredicted RBP12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 SCN5AQ14524 2016 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 ZMYND10O75800 440 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 PTH1RQ03431 593 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 GRM4Q14833 912 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 PTGISQ16647 500 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 NCOA7Q8NI08 942 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 PDCD2LQ9BRP1 358 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 YBX2Q9Y2T7 364 aaKnown RBP12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 MRVI1Q9Y6F6 885 aa12.8□□□□□ -0.36
IGHV1-17-201ENST00000520119 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 E7EWF7 191 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 SGSM2O43147 1006 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 PPP1R11O60927 126 aaPredicted RBP12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 WTAPQ15007 396 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 VSIG10LQ86VR7 867 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 HOMER1Q86YM7 354 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 DHX37Q8IY37 1157 aaKnown RBP12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 USP38Q8NB14 1042 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 PPTC7Q8NI37 304 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 PPP1R13LQ8WUF5 828 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 KAT2BQ92831 832 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 EPAS1Q99814 870 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 KATNAL1Q9BW62 490 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 MYH7BA7E2Y1 1941 aa12.79□□□□□ -0.36
IGHV1-17-201ENST00000520119 TRANK1O15050 2925 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 PNMA6FA0A0J9YX94 578 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 GCOM1H8Y6P7 765 aaPredicted RBP12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 PARNO95453 639 aaKnown RBP12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 POLR2MP0CAP2 368 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 TGFB3P10600 412 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 RABGGTBP53611 331 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 TROAPQ12815 778 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 CATIPQ7Z7H3 387 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 C7orf31Q8N865 590 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 PHOSPHO2Q8TCD6 241 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 PIGSQ96S52 555 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 FTOQ9C0B1 505 aaKnown RBP eCLIP12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
IGHV1-17-201ENST00000520119 MUC3AQ02505 3323 aa12.77□□□□□ -0.36
IGHV1-17-201ENST00000520119 PPFIA4O75335 1185 aa12.77□□□□□ -0.37
IGHV1-17-201ENST00000520119 RGS20O76081 388 aa12.77□□□□□ -0.37
IGHV1-17-201ENST00000520119 BAIAP3O94812 1187 aa12.77□□□□□ -0.37
IGHV1-17-201ENST00000520119 F2P00734 622 aa12.77□□□□□ -0.37
IGHV1-17-201ENST00000520119 HOXD8P13378 290 aaPredicted RBP12.77□□□□□ -0.37
IGHV1-17-201ENST00000520119 SELPP16109 830 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms