RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 DDX42Q86XP3 938 aaKnown RBP eCLIP14.86□□□□□ -0.03
PABPC1-208ENST00000519004 ANKRD13CQ8N6S4 541 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 USHBP1Q8N6Y0 703 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 OXER1Q8TDS5 423 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 PBKQ96KB5 322 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 PICK1Q9NRD5 415 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.86□□□□□ -0.03
PABPC1-208ENST00000519004 NEURL1BA8MQ27 555 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 ZNF213O14771 459 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 BUB1O43683 1085 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 FLOT1O75955 427 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 OAS1P00973 400 aaKnown RBP14.86□□□□□ -0.03
PABPC1-208ENST00000519004 SHBGP04278 402 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 MTMR3Q13615 1198 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 KLHL7Q8IXQ5 586 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 ADAM7Q9H2U9 754 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 TMEM165Q9HC07 324 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 GOPCQ9HD26 462 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.86□□□□□ -0.03
PABPC1-208ENST00000519004 BCL9O00512 1426 aa14.86□□□□□ -0.03
PABPC1-208ENST00000519004 A0A1W2PQJ5 194 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 SMAPO00193 183 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
PABPC1-208ENST00000519004 EIF4A3P38919 411 aaKnown RBP14.85□□□□□ -0.03
PABPC1-208ENST00000519004 STAT6P42226 847 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 KLC1Q07866 573 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 GCKRQ14397 625 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 TRAPPC9Q96Q05 1148 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 TMEM59LQ9UK28 342 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 GTPBP6O43824 516 aaPredicted RBP14.85□□□□□ -0.03
PABPC1-208ENST00000519004 HIP1RO75146 1068 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 TNNC1P63316 161 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 AIMP1Q12904 312 aaKnown RBP14.85□□□□□ -0.03
PABPC1-208ENST00000519004 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 SYCP3Q8IZU3 236 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 KRT23Q9C075 422 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 DLGAP2Q9P1A6 1054 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 TRIM33Q9UPN9 1127 aa14.85□□□□□ -0.03
PABPC1-208ENST00000519004 A2ML1A8K2U0 1454 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 FAM205CA6NFA0 338 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 BTBD11A6QL63 1104 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 F8VZ95 297 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 PSMC4P43686 418 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 DNA2P51530 1060 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 FIGNQ5HY92 759 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 ACBD5Q5T8D3 534 aaPredicted RBP14.84□□□□□ -0.03
PABPC1-208ENST00000519004 ADSSL1Q8N142 457 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 USP38Q8NB14 1042 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 WASF1Q92558 559 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 NEUROD6Q96NK8 337 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 SLX1AQ9BQ83 275 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 CCDC134Q9H6E4 229 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 INCENPQ9NQS7 918 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 PLAGL2Q9UPG8 496 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 TOPAZ1Q8N9V7 1692 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 MYH1P12882 1939 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 DISP2A7MBM2 1401 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 SNX3O60493 162 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 LGR5O75473 907 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 ACADSP16219 412 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 MAGEA1P43355 309 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 MMP13P45452 471 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
PABPC1-208ENST00000519004 RNASE9P60153 205 aaKnown RBP14.84□□□□□ -0.03
PABPC1-208ENST00000519004 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 TMC3Q7Z5M5 1100 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 TBC1D10CQ8IV04 446 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 FGD4Q96M96 766 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 TUBGCP2Q9BSJ2 902 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 METP08581 1390 aa14.84□□□□□ -0.03
PABPC1-208ENST00000519004 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 E7ENQ6 273 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 BAG3O95817 575 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 RPN1P04843 607 aaKnown RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 IFIT1P09914 478 aaKnown RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 PEX5P50542 639 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 FBF1Q8TES7 1133 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 IFT74Q96LB3 600 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 RNPEPL1Q9HAU8 725 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 LY9Q9HBG7 655 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 SPEF2Q9C093 1822 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 IFNAR1P17181 557 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 CALB2P22676 271 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 MAGEA10P43363 369 aaPredicted RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 RAD23BP54727 409 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 TIMM10P62072 90 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 RABL6Q3YEC7 729 aaPredicted RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 TRIM42Q8IWZ5 723 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 RNF10Q8N5U6 811 aaKnown RBP14.83□□□□□ -0.04
PABPC1-208ENST00000519004 NBPF15Q8N660 670 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 IGDCC4Q8TDY8 1250 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 FAM136AQ96C01 138 aa14.83□□□□□ -0.04
PABPC1-208ENST00000519004 PCMTD1Q96MG8 357 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms