RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 PCNX4Q63HM2 1172 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 CATSPERGQ6ZRH7 1159 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 NELFBQ8WX92 580 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 SLC5A5Q92911 643 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
SPIDR-203ENST00000517693 RIT2Q99578 217 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 MXRA8Q9BRK3 442 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 TEX13BQ9BXU2 312 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 HSD3B7Q9H2F3 369 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
SPIDR-203ENST00000517693 GLTPD2A6NH11 291 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 PPATQ06203 517 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 SPIRE1Q08AE8 756 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 MCM6Q14566 821 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
SPIDR-203ENST00000517693 PROCA1Q8NCQ7 364 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-203ENST00000517693 ATG4CQ96DT6 458 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 ZNF577Q9BSK1 485 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 TEKT3Q9BXF9 490 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
SPIDR-203ENST00000517693 PAPPA2Q9BXP8 1791 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 MEIS1O00470 390 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 NFIBO00712 420 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 ATP1A3P13637 1013 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PTGS1P23219 599 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PRCPP42785 496 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 ERO1BQ86YB8 467 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 DDX12PQ92771 950 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 MAGEC2Q9UBF1 373 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 KIAA1024Q9UPX6 916 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 POTECB2RU33 542 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 ADM5C9JUS6 153 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 CXCL11O14625 94 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PSMD10O75832 226 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 STAM2O75886 525 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PLA2G4BP0C869 781 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 TMC6Q7Z403 805 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-203ENST00000517693 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
SPIDR-203ENST00000517693 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 MYMKA6NI61 221 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 IPO5O00410 1097 aaKnown RBP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 SFPQP23246 707 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 CCNE1P24864 410 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 EEF1GP26641 437 aaKnown RBP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 COPB2P35606 906 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 STX17P56962 302 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
SPIDR-203ENST00000517693 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 TRIM47Q96LD4 638 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 TSG101Q99816 390 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 HOMER2Q9NSB8 354 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
SPIDR-203ENST00000517693 POLR2AP24928 1970 aaKnown RBP13.14□□□□□ -0.31
SPIDR-203ENST00000517693 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 LOXHD1Q8IVV2 1947 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 MAFGO15525 162 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 SSBP05455 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPIDR-203ENST00000517693 TPM1P09493 284 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 IDEP14735 1019 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 CCND2P30279 289 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 LRRC63Q05C16 580 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 PRKG1Q13976 671 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
SPIDR-203ENST00000517693 EPHA7Q15375 998 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 OTOP1Q7RTM1 612 aa13.14□□□□□ -0.31
SPIDR-203ENST00000517693 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms