RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 CYTH3O43739 400 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 DDAH1O94760 285 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 ARIH2O95376 493 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 POLR2MP0CAP2 368 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 IL9P15248 144 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 ATP2A2P16615 1042 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 EIF2AK2P19525 551 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 SMARCA1P28370 1054 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 KIF5BP33176 963 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 CCL23P55773 120 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 TAP1Q03518 808 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 NFXL1Q6ZNB6 911 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 SEPT14Q6ZU15 432 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 HFE2Q6ZVN8 426 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 ZNF654Q8IZM8 581 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 PRSS33Q8NF86 280 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 LZTS2Q9BRK4 669 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 SLC4A7Q9Y6M7 1214 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 ZFHX4Q86UP3 3567 aa12.24□□□□□ -0.45
PDGFRB-203ENST00000517660 ZNF318Q5VUA4 2279 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 MCM3APO60318 1980 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 CCDC69A6NI79 296 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 SH2B2O14492 632 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 ST18O60284 1047 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 GH1P01241 217 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 LIFRP42702 1097 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 GNAQP50148 359 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 VSIG10LQ86VR7 867 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 PDCD2LQ9BRP1 358 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 ALDH8A1Q9H2A2 487 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 DMDP11532 3685 aa12.23□□□□□ -0.45
PDGFRB-203ENST00000517660 B4GALT4O60513 344 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 CDC45O75419 566 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 CALM1P0DP23 149 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 CALM2P0DP24 149 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 CALM3P0DP25 149 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 HOXA13P31271 388 aaPredicted RBP12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 LY6KQ17RY6 165 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 RRP36Q96EU6 259 aaKnown RBP12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 CCDC136Q96JN2 1154 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 MYL10Q9BUA6 226 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 HIPK3Q9H422 1215 aa12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
PDGFRB-203ENST00000517660 MYCLP12524 364 aaPredicted RBP12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 ALADP13716 330 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 PTPN11Q06124 597 aaPredicted RBP12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 ARHGAP1Q07960 439 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 LAMC2Q13753 1193 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 FCHSD1Q86WN1 690 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 PIBF1Q8WXW3 757 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 SCLYQ96I15 445 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 UBE2ZQ9H832 354 aaPredicted RBP12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 TRMT13Q9NUP7 481 aaKnown RBP12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.45
PDGFRB-203ENST00000517660 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 DCXO43602 365 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 RGS20O76081 388 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 MMP3P08254 477 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 PGM5Q15124 567 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 FAM47CQ5HY64 1035 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 IER5LQ5T953 404 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 SGMS1Q86VZ5 419 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 SRBD1Q8N5C6 995 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 FANCBQ8NB91 859 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 NEK1Q96PY6 1258 aa12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 SEC63Q9UGP8 760 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-203ENST00000517660 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 TGFB3P10600 412 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 CYP2C9P11712 490 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 CCND2P30279 289 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 SSTR3P32745 418 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 FOXK2Q01167 660 aa12.19□□□□□ -0.46
PDGFRB-203ENST00000517660 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms