RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 MBTPS1Q14703 1052 aa26.61■■□□□ 1.85
SMAD1-214ENST00000514831 PDCD2LQ9BRP1 358 aa26.61■■□□□ 1.85
SMAD1-214ENST00000514831 LRFN3Q9BTN0 628 aa26.61■■□□□ 1.85
SMAD1-214ENST00000514831 MTUS1Q9ULD2 1270 aa26.61■■□□□ 1.85
SMAD1-214ENST00000514831 RGS20O76081 388 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 MYSM1Q5VVJ2 828 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 CWC27Q6UX04 472 aaKnown RBP26.6■■□□□ 1.85
SMAD1-214ENST00000514831 SMC5Q8IY18 1101 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 DSCC1Q9BVC3 393 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 OSBPL3Q9H4L5 887 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 VAT1LQ9HCJ6 419 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 MAP3K20Q9NYL2 800 aaKnown RBP26.6■■□□□ 1.85
SMAD1-214ENST00000514831 ARIH1Q9Y4X5 557 aaPredicted RBP26.6■■□□□ 1.85
SMAD1-214ENST00000514831 EMSYQ7Z589 1322 aa26.6■■□□□ 1.85
SMAD1-214ENST00000514831 PPFIA4O75335 1185 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 LGR5O75473 907 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 MKRN4PQ13434 485 aaPredicted RBP26.59■■□□□ 1.85
SMAD1-214ENST00000514831 IMMTQ16891 758 aaKnown RBP26.59■■□□□ 1.85
SMAD1-214ENST00000514831 KCNV1Q6PIU1 500 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 MTMR8Q96EF0 704 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 UBAC1Q9BSL1 405 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 KRT23Q9C075 422 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 DIAPH3Q9NSV4 1193 aa26.59■■□□□ 1.85
SMAD1-214ENST00000514831 ZNF200P98182 395 aaPredicted RBP26.58■■□□□ 1.85
SMAD1-214ENST00000514831 HIC1Q14526 733 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 HSDL1Q3SXM5 330 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 TMEM31Q5JXX7 168 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 CELF3Q5SZQ8 465 aaKnown RBP26.58■■□□□ 1.85
SMAD1-214ENST00000514831 STOX1Q6ZVD7 989 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 PLEKHM2Q8IWE5 1019 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 STAG2Q8N3U4 1231 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 SAMD3Q8N6K7 520 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 UBE2ZQ9H832 354 aaPredicted RBP26.58■■□□□ 1.85
SMAD1-214ENST00000514831 CNNM2Q9H8M5 875 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 HCN4Q9Y3Q4 1203 aa26.58■■□□□ 1.85
SMAD1-214ENST00000514831 COL4A6Q14031 1691 aa26.57■■□□□ 1.84
SMAD1-214ENST00000514831 PPP1R11O60927 126 aaPredicted RBP26.57■■□□□ 1.84
SMAD1-214ENST00000514831 SERINC5Q86VE9 423 aa26.57■■□□□ 1.84
SMAD1-214ENST00000514831 SPATA33Q96N06 139 aa26.57■■□□□ 1.84
SMAD1-214ENST00000514831 INSL6Q9Y581 213 aa26.57■■□□□ 1.84
SMAD1-214ENST00000514831 HIP1O00291 1037 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 ZBTB5O15062 677 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 GGPS1O95749 300 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 MYCLP12524 364 aaPredicted RBP26.56■■□□□ 1.84
SMAD1-214ENST00000514831 UBA1P22314 1058 aaKnown RBP26.56■■□□□ 1.84
SMAD1-214ENST00000514831 PGM5Q15124 567 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 IFIT1BQ5T764 474 aaKnown RBP26.56■■□□□ 1.84
SMAD1-214ENST00000514831 FAM117BQ6P1L5 589 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 KHSRPQ92945 711 aaKnown RBP eCLIP26.56■■□□□ 1.84
SMAD1-214ENST00000514831 C16orf70Q9BSU1 422 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 CTNNA3Q9UI47 895 aa26.56■■□□□ 1.84
SMAD1-214ENST00000514831 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-214ENST00000514831 KLRF2D3W0D1 207 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 TGFB3P10600 412 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 HOXC8P31273 242 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 AAMPQ13685 434 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMAD1-214ENST00000514831 VSIG10LQ86VR7 867 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 CHD1LQ86WJ1 897 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 IL31RAQ8NI17 732 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 C11orf16Q9NQ32 467 aa26.55■■□□□ 1.84
SMAD1-214ENST00000514831 NLRC5Q86WI3 1866 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 RSPH10B2B2RC85 870 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 GPR37L1O60883 481 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 AMHP03971 560 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 RSPH10BP0C881 870 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 HTRA4P83105 476 aaPredicted RBP26.54■■□□□ 1.84
SMAD1-214ENST00000514831 SEC23AQ15436 765 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 LEXMQ3ZCV2 418 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 FBXO22Q8NEZ5 403 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 DBF4BQ8NFT6 615 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 SP7Q8TDD2 431 aaPredicted RBP26.54■■□□□ 1.84
SMAD1-214ENST00000514831 C17orf80Q9BSJ5 609 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 MAD2L2Q9UI95 211 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 PCDHA1Q9Y5I3 950 aa26.54■■□□□ 1.84
SMAD1-214ENST00000514831 RBAK-RBAKDNI3L0D1 243 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 HOXA13P31271 388 aaPredicted RBP26.53■■□□□ 1.84
SMAD1-214ENST00000514831 HOXD11P31277 338 aaPredicted RBP26.53■■□□□ 1.84
SMAD1-214ENST00000514831 THPOP40225 353 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 PLEKHG4Q58EX7 1191 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 MYOCDQ8IZQ8 938 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 CD320Q9NPF0 282 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 RALGAPA2Q2PPJ7 1873 aa26.53■■□□□ 1.84
SMAD1-214ENST00000514831 SORBS3O60504 671 aa26.52■■□□□ 1.84
SMAD1-214ENST00000514831 CCND2P30279 289 aa26.52■■□□□ 1.84
SMAD1-214ENST00000514831 SP2Q02086 613 aa26.52■■□□□ 1.84
SMAD1-214ENST00000514831 DOCK5Q9H7D0 1870 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 C17orf102A2RUQ5 167 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 PALM3A6NDB9 673 aaPredicted RBP26.51■■□□□ 1.83
SMAD1-214ENST00000514831 PI4K2BG5E9Z4 385 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 NUCB1Q02818 461 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 TRAF1Q13077 416 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 ATP6V0A1Q93050 837 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 SAMD11Q96NU1 681 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 RWDD1Q9H446 243 aaPredicted RBP26.51■■□□□ 1.83
SMAD1-214ENST00000514831 MLXIPQ9HAP2 919 aa26.51■■□□□ 1.83
SMAD1-214ENST00000514831 H3BRB1 525 aa26.5■■□□□ 1.83
SMAD1-214ENST00000514831 CAND2O75155 1236 aa26.5■■□□□ 1.83
SMAD1-214ENST00000514831 LGALS2P05162 132 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms