RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 CUL5Q93034 780 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 TIFAQ96CG3 184 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 KATNAL1Q9BW62 490 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 PBX4Q9BYU1 374 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
HMGXB3-205ENST00000514469 PBX2P40425 430 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 RBL2Q08999 1139 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 BFSP2Q13515 415 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 MFSD10Q14728 455 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 PTGISQ16647 500 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 KCNB2Q92953 911 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 TCEANC2Q96MN5 208 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
HMGXB3-205ENST00000514469 hCG_1642624A0A1W2PR95 340 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 SPATA31C2B4DYI2 1134 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 FIBPO43427 364 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 SORBS3O60504 671 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 IQCF3P0C7M6 154 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 FUT2Q10981 343 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 C7orf31Q8N865 590 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 SLC17A8Q8NDX2 589 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 MYLIPQ8WY64 445 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 NID2Q14112 1375 aa12.04□□□□□ -0.48
HMGXB3-205ENST00000514469 ZBTB43O43298 467 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 HOXC8P31273 242 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 HSPA4P34932 840 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 RCAN1P53805 252 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 NEDD9Q14511 834 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 RAB30Q15771 203 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 UBE2SQ16763 222 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 RTN1Q16799 776 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 WWC2Q6AWC2 1192 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 HEATR3Q7Z4Q2 680 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 RETREG2Q8NC44 543 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 SLC4A7Q9Y6M7 1214 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 CHD7Q9P2D1 2997 aa12.03□□□□□ -0.48
HMGXB3-205ENST00000514469 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.48
HMGXB3-205ENST00000514469 KLF18A0A0U1RQI7 1052 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 ZBBXA8MT70 800 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 LGALS2P05162 132 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 FOSL2P15408 326 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 SELPP16109 830 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 PTK7Q13308 1070 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 HIC1Q14526 733 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 TRIM71Q2Q1W2 868 aaKnown RBP12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 CYFIP1Q7L576 1253 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 GPRASP2Q96D09 838 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 GPR20Q99678 358 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 MSRAQ9UJ68 235 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 YBX2Q9Y2T7 364 aaKnown RBP12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.49
HMGXB3-205ENST00000514469 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 BAZ2BQ9UIF8 2168 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 H3BRB1 525 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 NOP56O00567 594 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 CKBP12277 381 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 ACTN1P12814 892 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms