RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 ZBED4O75132 1171 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
TRIO-220ENST00000512979 RTP1P59025 263 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 TFAP4Q01664 338 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 SLFN13Q68D06 897 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 TDHQ8IZJ6 230 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
TRIO-220ENST00000512979 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 NRBP1Q9UHY1 535 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 FEM1BQ9UK73 627 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
TRIO-220ENST00000512979 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 SZT2Q5T011 3432 aa11.17□□□□□ -0.62
TRIO-220ENST00000512979 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 FOXP2O15409 715 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 RARBP10826 455 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 BMP3P12645 472 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 TAL1P17542 331 aaPredicted RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 PDE1AP54750 535 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 CLN3Q13286 438 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 LRRC41Q15345 812 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 ZDHHC1Q8WTX9 485 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 EVI5LQ96CN4 794 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 LBHD1Q9BQE6 289 aaPredicted RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 RAVER2Q9HCJ3 691 aaKnown RBP11.16□□□□□ -0.62
TRIO-220ENST00000512979 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 CNPY2Q9Y2B0 182 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
TRIO-220ENST00000512979 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 TMEM232C9JQI7 657 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 ZNF865P0CJ78 1059 aaPredicted RBP11.15□□□□□ -0.62
TRIO-220ENST00000512979 AKR1A1P14550 325 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 NOS2P35228 1153 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 CBLBQ13191 982 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 TEAD4Q15561 434 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 LRIT3Q3SXY7 679 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 SLC39A5Q6ZMH5 540 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 FAM161BQ96MY7 647 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 INCENPQ9NQS7 918 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIO-220ENST00000512979 HCN4Q9Y3Q4 1203 aa11.15□□□□□ -0.62
TRIO-220ENST00000512979 SYNGAP1Q96PV0 1343 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 PRPF40AO75400 957 aaKnown RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 PGK1P00558 417 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 SLC1A4P43007 532 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 STAT2P52630 851 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 OAZ1P54368 228 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 CENPCQ03188 943 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 NNTQ13423 1086 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 SNX17Q15036 470 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 RNF180Q86T96 592 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 ALDH16A1Q8IZ83 802 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 ANKRD35Q8N283 1001 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 DUSP9Q99956 384 aaKnown RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 PRDM5Q9NQX1 630 aaPredicted RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 PARP2Q9UGN5 583 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 FBXO40Q9UH90 709 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
TRIO-220ENST00000512979 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
TRIO-220ENST00000512979 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
TRIO-220ENST00000512979 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 DNAJC25-GNG10A0A024R161 153 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
TRIO-220ENST00000512979 NMT2O60551 498 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 SNAI1O95863 264 aaPredicted RBP11.13□□□□□ -0.63
TRIO-220ENST00000512979 MCCP23508 829 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 SLC19A1P41440 591 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 FAM160B2Q86V87 743 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 ETFBKMTQ8IXQ9 262 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 CHURC1Q8WUH1 139 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 RNF19AQ9NV58 838 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 ANAPC4Q9UJX5 808 aa11.13□□□□□ -0.63
TRIO-220ENST00000512979 PHF24Q9UPV7 400 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms